| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2276 |
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| Symbol | |
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| ID | 3904810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2654498 |
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| End bp | 2656957 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637879607 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_481373 |
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| Protein GI | 86740973 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase
[COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000198235 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000271662 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCCACCC GGACGAGCAG GGCCCAGGCG GCGCAGCGGT GCAGCGGATG CTCACCGGAC
GAGCAGGTGG CGGTGCAGGT GACGGCAGCG GAGGTCAGGG TGGGGCTGCG TGAGCGGCTC
GCGGGCAGGC GGGTCCTGGT GACCGGGGTG ACCGGGTTCG TCGGGGAGGC GCTGCTGGAA
CGGTTGCTGT CGGACTTCCC CGACACGGCG GTGGTGGCGC TGGTGCGGCC GCGGGGCAGT
CACAGCGGGG CGGCGCGGCT GGCGCGGATG ATGCGGAAGC CGGCGTTTCG CGGGTTGCGG
GAGGGGTTGG GTGCGGCGGG GGTGGCGGCG CTGCTCGCCG AGCGGGTGGA GGTGATCGAG
GGGGATCTGG CGTCGATGCC GGATCTGCCC GCCGACCTCG ACGTGGTCAT CCACTGTGCC
GGGGAGGTGT CGTTCGACCC GCCGGTCGAC GAGGCGTTCA CCACGAACGT CGGTGGGGTG
GCGGAGCTGC TGCGGGCGCT TGCGGCCGGG GGGGCCAGGC CTCATCTGGT GCATGTGTCG
ACGGCGTATG TGGCGGGGTT GCGTTCGGGG CACATCGCCG AGGGGCCGCT GGCCCATGAC
GTGGACTGGC GGGTCGAGTG GGATGCGGCG TCGCGGGTGC GCCAGCAGAC CGAGGACGCC
TCGCGGGCGC CGGAGTGTTC GGCGCGGTTT CGGGCGCAGG CGTCGCGGCG GTTCGCCGCC
GCCGGGGCGC AGACGGTGTC GGCGGAGGCG GAGCGGCTGC GCCGGGCGTG GGTGGCGCGG
CGGATGGTGA CGGCCGGGGG TGAGCGGGCG CAGGTGCTGG GGTGGACGGA TGCGTACACG
TTCACCAAGG CGTTGGGTGA GCGGTATCTG GAGGATCATC ACGGGGATCT GCCGTTGACG
GTCGTCCGTC CCTCGATCAT CGAGAGTGCG CTGCGCCGGC CGTTCCCGGG GTGGATCGAG
GGGTTCAAGA TGGCCGAGCC GCTGATCCTG GCCTATGGCC GCGGTGAGCT GCCGGACTTC
CCCGCCTCCC CGGACGCGGT GGTGGACATC ATCCCGGTGG ATCTGGTTGT CAACGCGATC
CTGGCGGCGG CGGCGGTGGT GCCGCCGGCG GACACCCCGG CCTATTACAC GGTGTGTTCG
GGTTTTCGTA ATCCGTTGCT GTTTCGGGAT CTGTACGCCT ATGTGCGGGA CTATTTCCAG
GCCGATCCGT TGCCGCGGCG CGGTCGGGGG ACGTTCGCGG TGCCGGAGTG GCCGTTCGCG
GGGGCGGCGG CGGTGGAGGC GAAGCTGCGT CGCTCGGAGC GGCTGGTGGG GTTGGCGGGC
CGGGCGTTGG AGCATGCCCC GCCCTCGGAT CGGGTGCGCC GGTTTGCCGG GGAGCTGGAG
CGGGCGGAGA GCCGGGTGGG GTTTCTGCGC CGCTACTCGG ATGTGTACCG GGCGTACACG
AAGGCGGAGC TGGTCTATGT CGACGACGCC ACGGGTGCGT TGCACGCGGC GATGGATCCG
GCCGATCAGG CGGAGTTCGG GTTTGATCCG GCGTGTTTCG ACTGGCGGCA CTATCTGCAG
GACGTGCACT GCCCGGCGGT GACGGCGGTG CTGCGCCGGC CGCGTGATCC CGCGCCGCCG
CGGCGGCTGT CGGGGCATCT GGCCGCCGGT GACGGGGTGC TGGCGGTGTT CGACCTGGAT
GGGGCGGTGG CGTCGGCGAC GGTGATCGAG TCGTATCTGT GGATGCGGTT GGCGGACGCC
TCGGCGCCGC GGCGGGTGCG GGAGCTTGCG TCGCTGGCGG TGGCGTTGCC GCGGTATGTG
CGTGCGGAGC GTCGTGACCG GGGGCATCTG ATGCGGTCGG TGTACGCGCG CTACGCGGGG
GTGGATCCGG CGGAGTTGGA ACGGCTGGTG GTGGAGGTCG CCGGGGACAT TCTGCTGCGG
CGGGTGAAAC CGGCGGGGAT CCGTCGGGTG CGTGAGCATC GGGCGGCGGG GCATCGCACG
GTGCTGCTGA CCGGGGCGGT GGAGGTGTTG ACGCGGCCGT TCGCGCCGTT GTTCGACGAT
GTGGTCGCCG CGCGGCTGGA GGTGGGTGCG GATGGTCTGC TGACCGGCCG GTTGGAGTCC
TCGCCGCTGG TCGGGGATGC GCGGGCGGCG TTCATTGATC ATCATGCGCG GGTGTTGGGG
GCGGATCTGG GGGTGTCGTG GGCGTATGCG GACAGCCAGT CGGATCTGCC GTTGCTGCGG
GCGGTCGGTA ACCCGGTGGC GGTGAACCCG GATCTCGCGT TGCATCAGGT GGCGCGGGGG
GCGGGGTGGC CGATCGAGGA GTGGGCGTCG GCGGCCGGGG AGCCGCGTCT GGTCGTCGGG
GACCGTCGGG AGCGTGGCCT GCGGGCCGCG GCGGCGCGGG CGGGGGCGGC GGCCTTGAGC
TCAAGGCCAG GCCCGGGCAC GGGGCCGGCG GGGGTCGTGG TGTCGGGGGG TGGGCGGTGA
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| Protein sequence | MPTRTSRAQA AQRCSGCSPD EQVAVQVTAA EVRVGLRERL AGRRVLVTGV TGFVGEALLE
RLLSDFPDTA VVALVRPRGS HSGAARLARM MRKPAFRGLR EGLGAAGVAA LLAERVEVIE
GDLASMPDLP ADLDVVIHCA GEVSFDPPVD EAFTTNVGGV AELLRALAAG GARPHLVHVS
TAYVAGLRSG HIAEGPLAHD VDWRVEWDAA SRVRQQTEDA SRAPECSARF RAQASRRFAA
AGAQTVSAEA ERLRRAWVAR RMVTAGGERA QVLGWTDAYT FTKALGERYL EDHHGDLPLT
VVRPSIIESA LRRPFPGWIE GFKMAEPLIL AYGRGELPDF PASPDAVVDI IPVDLVVNAI
LAAAAVVPPA DTPAYYTVCS GFRNPLLFRD LYAYVRDYFQ ADPLPRRGRG TFAVPEWPFA
GAAAVEAKLR RSERLVGLAG RALEHAPPSD RVRRFAGELE RAESRVGFLR RYSDVYRAYT
KAELVYVDDA TGALHAAMDP ADQAEFGFDP ACFDWRHYLQ DVHCPAVTAV LRRPRDPAPP
RRLSGHLAAG DGVLAVFDLD GAVASATVIE SYLWMRLADA SAPRRVRELA SLAVALPRYV
RAERRDRGHL MRSVYARYAG VDPAELERLV VEVAGDILLR RVKPAGIRRV REHRAAGHRT
VLLTGAVEVL TRPFAPLFDD VVAARLEVGA DGLLTGRLES SPLVGDARAA FIDHHARVLG
ADLGVSWAYA DSQSDLPLLR AVGNPVAVNP DLALHQVARG AGWPIEEWAS AAGEPRLVVG
DRRERGLRAA AARAGAAALS SRPGPGTGPA GVVVSGGGR
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