290 homologs were found in PanDaTox collection
for query gene Tpau_3910 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_3910  HAD-superfamily subfamily IB hydrolase  100 
 
 
284 aa  585  1e-166  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0274  HAD-superfamily subfamily IB hydrolase, TIGR01490  66.92 
 
 
270 aa  371  1e-102  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4807  HAD family hydrolase  64.68 
 
 
285 aa  360  2e-98  Mycobacterium sp. MCS  Bacteria  normal  0.0376166  n/a   
 
 
-
 
NC_008705  Mkms_4893  HAD family hydrolase  64.68 
 
 
285 aa  360  2e-98  Mycobacterium sp. KMS  Bacteria  normal  normal  0.271167 
 
 
-
 
NC_009077  Mjls_5194  HAD family hydrolase  65.04 
 
 
285 aa  358  5e-98  Mycobacterium sp. JLS  Bacteria  normal  0.421915  hitchhiker  0.000238579 
 
 
-
 
NC_009565  TBFG_13691  hypothetical protein  65.93 
 
 
287 aa  357  1.9999999999999998e-97  Mycobacterium tuberculosis F11  Bacteria  normal  0.148419  normal  0.360878 
 
 
-
 
NC_008726  Mvan_5423  HAD family hydrolase  64.34 
 
 
313 aa  345  5e-94  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.988036 
 
 
-
 
NC_009338  Mflv_1382  HAD family hydrolase  61.87 
 
 
307 aa  341  9e-93  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0503045  normal  0.084913 
 
 
-
 
NC_013159  Svir_35940  HAD-superfamily subfamily IB hydrolase, TIGR01490  60.08 
 
 
280 aa  324  1e-87  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.330222  normal  0.156171 
 
 
-
 
NC_013441  Gbro_0515  HAD-superfamily subfamily IB hydrolase, TIGR01490  60.75 
 
 
289 aa  317  1e-85  Gordonia bronchialis DSM 43247  Bacteria  normal  0.589704  n/a   
 
 
-
 
NC_013757  Gobs_0590  HAD-superfamily subfamily IB hydrolase, TIGR01490  60.08 
 
 
280 aa  315  6e-85  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.841556  n/a   
 
 
-
 
NC_013131  Caci_0054  HAD-superfamily subfamily IB hydrolase, TIGR01490  59.84 
 
 
281 aa  310  2e-83  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2800  HAD-superfamily subfamily IB hydrolase, TIGR01490  61.48 
 
 
275 aa  296  3e-79  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00283353 
 
 
-
 
NC_013521  Sked_33380  HAD-superfamily subfamily IB hydrolase, TIGR01490  58.08 
 
 
265 aa  295  6e-79  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.156612  normal 
 
 
-
 
NC_013530  Xcel_0320  HAD-superfamily subfamily IB hydrolase, TIGR01490  59.05 
 
 
258 aa  293  2e-78  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.369561  n/a   
 
 
-
 
NC_008699  Noca_0362  HAD family hydrolase  57.85 
 
 
289 aa  287  1e-76  Nocardioides sp. JS614  Bacteria  hitchhiker  0.00108694  n/a   
 
 
-
 
NC_013947  Snas_6363  HAD-superfamily subfamily IB hydrolase TIGR01490  53.46 
 
 
272 aa  279  3e-74  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.499829  normal 
 
 
-
 
NC_009380  Strop_4041  HAD family hydrolase  59.03 
 
 
267 aa  279  4e-74  Salinispora tropica CNB-440  Bacteria  normal  0.946878  normal 
 
 
-
 
NC_009953  Sare_4432  HAD family hydrolase  57.64 
 
 
270 aa  273  2.0000000000000002e-72  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000343409 
 
 
-
 
NC_013174  Jden_2226  HAD-superfamily subfamily IB hydrolase, TIGR01490  52.61 
 
 
282 aa  246  4e-64  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.98055 
 
 
-
 
NC_013124  Afer_1925  HAD-superfamily subfamily IB hydrolase, TIGR01490  45.19 
 
 
273 aa  197  1.0000000000000001e-49  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2740  HAD-superfamily subfamily IB hydrolase, TIGR01490  36.7 
 
 
288 aa  150  2e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0297875 
 
 
-
 
NC_013521  Sked_07130  HAD-superfamily subfamily IB hydrolase, TIGR01490  35.32 
 
 
311 aa  139  4.999999999999999e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.371793 
 
 
-
 
NC_013739  Cwoe_4644  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.88 
 
 
286 aa  134  1.9999999999999998e-30  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.460145 
 
 
-
 
NC_012669  Bcav_3259  HAD-superfamily subfamily IB hydrolase, TIGR01490  36.07 
 
 
263 aa  132  5e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.107889  normal  0.303521 
 
 
-
 
NC_013530  Xcel_0438  HAD-superfamily subfamily IB hydrolase, TIGR01490  34.93 
 
 
268 aa  131  1.0000000000000001e-29  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1270  HAD family hydrolase  34.72 
 
 
217 aa  127  2.0000000000000002e-28  Pseudomonas putida W619  Bacteria  normal  normal  0.0449796 
 
 
-
 
NC_007333  Tfu_2722  HAD family hydrolase  32.91 
 
 
305 aa  126  4.0000000000000003e-28  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3299  HAD family hydrolase  31.11 
 
 
272 aa  125  6e-28  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3098  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.72 
 
 
272 aa  125  1e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009953  Sare_0418  HAD family hydrolase  33.33 
 
 
312 aa  124  2e-27  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00884178 
 
 
-
 
NC_013235  Namu_0916  HAD-superfamily subfamily IB hydrolase, TIGR01490  32.41 
 
 
297 aa  122  5e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5286  HAD-superfamily hydrolase  33.03 
 
 
218 aa  122  7e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1313  HAD family hydrolase  33.33 
 
 
217 aa  122  8e-27  Pseudomonas putida GB-1  Bacteria  normal  normal  0.448818 
 
 
-
 
NC_009439  Pmen_4219  HAD family hydrolase  32.43 
 
 
217 aa  122  9e-27  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4844  HAD family hydrolase  33.03 
 
 
218 aa  120  1.9999999999999998e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0428  hypothetical protein  33.33 
 
 
217 aa  120  3e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  0.469146  n/a   
 
 
-
 
NC_010501  PputW619_0318  HAD family hydrolase  31.84 
 
 
218 aa  119  3.9999999999999996e-26  Pseudomonas putida W619  Bacteria  normal  normal  0.13474 
 
 
-
 
NC_009380  Strop_0348  HAD family hydrolase  33.72 
 
 
290 aa  119  4.9999999999999996e-26  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3998  HAD family hydrolase  33.33 
 
 
217 aa  119  7e-26  Pseudomonas putida F1  Bacteria  normal  0.050869  normal  0.239622 
 
 
-
 
NC_009921  Franean1_6135  HAD family hydrolase  34.23 
 
 
294 aa  119  7e-26  Frankia sp. EAN1pec  Bacteria  normal  normal  0.415462 
 
 
-
 
NC_007005  Psyr_1601  HAD family hydrolase  37.27 
 
 
217 aa  118  9.999999999999999e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0403422 
 
 
-
 
NC_013093  Amir_6738  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.73 
 
 
294 aa  118  9.999999999999999e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4355  HAD-superfamily subfamily IB hydrolase, TIGR01490  32 
 
 
262 aa  118  9.999999999999999e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.571582 
 
 
-
 
NC_002947  PP_1721  HAD superfamily hydrolase  33.33 
 
 
217 aa  117  1.9999999999999998e-25  Pseudomonas putida KT2440  Bacteria  normal  0.566146  normal  0.0514647 
 
 
-
 
NC_014165  Tbis_0255  HAD-superfamily hydrolase  32.26 
 
 
286 aa  117  1.9999999999999998e-25  Thermobispora bispora DSM 43833  Bacteria  normal  0.185675  normal 
 
 
-
 
NC_008463  PA14_04380  hypothetical protein  32.43 
 
 
217 aa  116  3.9999999999999997e-25  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10516  phosphoserine phosphatase serB1  33.64 
 
 
373 aa  116  5e-25  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_5054  HAD family hydrolase  31.39 
 
 
218 aa  115  6e-25  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5147  HAD superfamily hydrolase  31.39 
 
 
218 aa  115  7.999999999999999e-25  Pseudomonas putida KT2440  Bacteria  normal  normal  0.416091 
 
 
-
 
NC_010322  PputGB1_5200  HAD family hydrolase  30.49 
 
 
218 aa  114  1.0000000000000001e-24  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8329  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.63 
 
 
266 aa  114  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.119426  normal 
 
 
-
 
NC_013510  Tcur_4446  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.67 
 
 
290 aa  114  2.0000000000000002e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6219  HAD-superfamily subfamily IB hydrolase TIGR01490  32.27 
 
 
289 aa  112  5e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0193  HAD family hydrolase  31.58 
 
 
518 aa  112  5e-24  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0459706  normal 
 
 
-
 
NC_007484  Noc_2017  HAD family hydrolase  30.63 
 
 
242 aa  112  6e-24  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_02790  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.48 
 
 
323 aa  112  8.000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5379  HAD family hydrolase  31.53 
 
 
218 aa  111  1.0000000000000001e-23  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.396939  normal  0.0228377 
 
 
-
 
NC_012560  Avin_48250  HAD-superfamily hydrolase subfamily IB, PSPase-like protein  32.88 
 
 
217 aa  111  2.0000000000000002e-23  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0481  HAD family hydrolase  30.87 
 
 
295 aa  111  2.0000000000000002e-23  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0542  Phosphoserine phosphatase-like protein  32.11 
 
 
289 aa  110  4.0000000000000004e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.260991 
 
 
-
 
NC_009664  Krad_0614  HAD-superfamily subfamily IB hydrolase, TIGR01490  35.51 
 
 
255 aa  109  4.0000000000000004e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.160629  normal  0.0475682 
 
 
-
 
NC_008740  Maqu_0813  HAD family hydrolase  30.88 
 
 
228 aa  109  5e-23  Marinobacter aquaeolei VT8  Bacteria  decreased coverage  0.00498763  n/a   
 
 
-
 
NC_007492  Pfl01_1681  HAD family hydrolase  34.74 
 
 
217 aa  109  6e-23  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.786603  normal 
 
 
-
 
NC_008340  Mlg_0426  HAD family hydrolase  31.16 
 
 
231 aa  108  7.000000000000001e-23  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0139155 
 
 
-
 
NC_009439  Pmen_1327  HAD family hydrolase  33.95 
 
 
217 aa  108  1e-22  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00757114  normal 
 
 
-
 
NC_013757  Gobs_4585  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.89 
 
 
306 aa  107  2e-22  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.601592  n/a   
 
 
-
 
NC_004578  PSPTO_3883  HAD-superfamily hydrolase  42.86 
 
 
193 aa  107  2e-22  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.91203  n/a   
 
 
-
 
NC_009656  PSPA7_1870  hypothetical protein  31.96 
 
 
216 aa  106  6e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  0.531495  n/a   
 
 
-
 
NC_002977  MCA2087  HAD family hydrolase  30.09 
 
 
220 aa  104  1e-21  Methylococcus capsulatus str. Bath  Bacteria  hitchhiker  0.00266008  n/a   
 
 
-
 
NC_009077  Mjls_0667  HAD family hydrolase  31.44 
 
 
300 aa  104  1e-21  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0674  HAD family hydrolase  31.44 
 
 
300 aa  104  1e-21  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2564  HAD family hydrolase  30.53 
 
 
570 aa  105  1e-21  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.341145  normal  0.242767 
 
 
-
 
NC_008705  Mkms_0687  HAD family hydrolase  31.44 
 
 
300 aa  104  1e-21  Mycobacterium sp. KMS  Bacteria  normal  normal  0.164292 
 
 
-
 
NC_009338  Mflv_0069  HAD family hydrolase  31.17 
 
 
295 aa  104  2e-21  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0248353  normal 
 
 
-
 
NC_008726  Mvan_4075  HAD family hydrolase  30.52 
 
 
525 aa  104  2e-21  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.588653 
 
 
-
 
NC_008699  Noca_0490  HAD family hydrolase  30.41 
 
 
297 aa  104  2e-21  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3628  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.78 
 
 
232 aa  103  2e-21  Haliangium ochraceum DSM 14365  Bacteria  normal  0.856585  hitchhiker  0.00143877 
 
 
-
 
NC_008709  Ping_3161  HAD family hydrolase  27.54 
 
 
252 aa  103  3e-21  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4653  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.16 
 
 
493 aa  102  8e-21  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1624  HAD family hydrolase  33.03 
 
 
218 aa  101  1e-20  Serratia proteamaculans 568  Bacteria  normal  normal  0.0119035 
 
 
-
 
NC_014158  Tpau_0665  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.28 
 
 
295 aa  101  1e-20  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.406953  n/a   
 
 
-
 
NC_013440  Hoch_6034  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.02 
 
 
222 aa  101  1e-20  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3624  1-acyl-sn-glycerol-3-phosphate acyltransferase  31.7 
 
 
561 aa  100  2e-20  Mycobacterium sp. JLS  Bacteria  normal  0.329409  normal 
 
 
-
 
NC_009654  Mmwyl1_3749  HAD family hydrolase  28.57 
 
 
218 aa  101  2e-20  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.045267 
 
 
-
 
NC_008146  Mmcs_3619  1-acyl-sn-glycerol-3-phosphate acyltransferase  31.7 
 
 
561 aa  100  2e-20  Mycobacterium sp. MCS  Bacteria  hitchhiker  0.00474083  n/a   
 
 
-
 
NC_008705  Mkms_3692  1-acyl-sn-glycerol-3-phosphate acyltransferase  31.7 
 
 
561 aa  100  2e-20  Mycobacterium sp. KMS  Bacteria  decreased coverage  0.000184882  normal 
 
 
-
 
NC_013889  TK90_0395  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.14 
 
 
228 aa  100  3e-20  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.771269  normal  0.534217 
 
 
-
 
NC_007912  Sde_0346  XRE family transcriptional regulator  28.11 
 
 
218 aa  100  3e-20  Saccharophagus degradans 2-40  Bacteria  normal  0.923957  normal  0.0904875 
 
 
-
 
NC_011901  Tgr7_2416  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.32 
 
 
219 aa  100  3e-20  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1214  HAD family hydrolase  31.31 
 
 
225 aa  99.8  4e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0597827  normal 
 
 
-
 
NC_008789  Hhal_0886  HAD family hydrolase  30.22 
 
 
227 aa  99.8  5e-20  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0843  HAD family hydrolase  30.13 
 
 
301 aa  99  9e-20  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.163877  normal  0.772835 
 
 
-
 
NC_007777  Francci3_2094  HAD family hydrolase  36.15 
 
 
226 aa  96.7  4e-19  Frankia sp. CcI3  Bacteria  normal  0.07906  normal 
 
 
-
 
NC_007947  Mfla_0520  HAD family hydrolase  28.57 
 
 
220 aa  95.5  9e-19  Methylobacillus flagellatus KT  Bacteria  normal  0.0927887  normal 
 
 
-
 
NC_008752  Aave_1972  HAD family hydrolase  30 
 
 
237 aa  94.7  1e-18  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0197287 
 
 
-
 
NC_007614  Nmul_A2615  HAD family hydrolase  27.85 
 
 
220 aa  95.1  1e-18  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1010  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.69 
 
 
352 aa  94.7  1e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  0.784708  n/a   
 
 
-
 
NC_007963  Csal_2578  HAD family hydrolase  33.78 
 
 
218 aa  94.7  1e-18  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009365  OSTLU_26514  predicted protein  30.24 
 
 
262 aa  94.4  2e-18  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.0100496  normal  0.0236046 
 
 
-
 
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