| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0508 |
|---|
| Symbol | |
|---|
| ID | 4678780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 508874 |
|---|
| End bp | 509560 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639844785 |
|---|
| Product | HAD-superfamily subfamily IB hydrolase |
|---|
| Protein accession | YP_991857 |
|---|
| Protein GI | 121601233 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATC TGGCACTTTT CGATCTGGAT CACACGCTGA TCCCCACCGA TAGCGATCAC
GAGTGGGGCC GCTTCATGGT CCGGCTCGGC ATCGTCGACG CGGACAGCTT CTCGCGTCAG
AACGACCGCT TCTACGCCGA CTACAAGGCC GGCAAGCTCG ACATCCACGC GTACCTGAGC
GCGATGCTCA CGCCGCTCGC GAAGTATTCG CGCGCGCAGC TCGCGCAGTG GCACGACCGG
TACATGCACG AAGTGATCCG GCCGGCGATG CTGCCCGCCG CGATCGAGCT CGTGCGCCGG
CATCAGGACG CGGGCGACCT CTGCTGCATC GTCACCGCGA CGAACGAATT CATCACGCGT
CCGATCGCGA CCGCGTTCGG CGTCGACACG CTGATCGCCT GCGAAGTGGA AACCGTCGAC
GGCCATCCCG ATTCCGCGTT CACCGGCCGC CCGACGGGCA CGCCGAGCTA CCGCGAAGGC
AAGATCACCC GCACGCAGGC GTGGCTCGCA TCGCTCGGCA AGCGCTGGGA CGATTTCGAC
CGCAGCTATT TCTACAGCGA TTCGCACAAC GACATTCCGC TCCTCGAAAA AGTCACCGAC
CCGATCGCGA CCAATCCCGA CGACACGCTG CGCGCATACG CACGCGAGCA CGGCTGGCGC
ATCCTCGACC TCTTCCAACC GTCGTGA
|
|---|
| Protein sequence | MTNLALFDLD HTLIPTDSDH EWGRFMVRLG IVDADSFSRQ NDRFYADYKA GKLDIHAYLS
AMLTPLAKYS RAQLAQWHDR YMHEVIRPAM LPAAIELVRR HQDAGDLCCI VTATNEFITR
PIATAFGVDT LIACEVETVD GHPDSAFTGR PTGTPSYREG KITRTQAWLA SLGKRWDDFD
RSYFYSDSHN DIPLLEKVTD PIATNPDDTL RAYAREHGWR ILDLFQPS
|
|---|
| |