Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3313 |
Symbol | |
ID | 3689891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 3629336 |
End bp | 3630022 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637729768 |
Product | HAD family hydrolase |
Protein accession | YP_334684 |
Protein GI | 76809307 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like [TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAATC TGGCACTTTT CGATCTGGAT CACACGCTGA TCCCCACCGA TAGCGATCAC GAGTGGGGCC GCTTCATGGT CCGGCTCGGC ATCGTCGACG CGGACAGCTT CTCGCGTCAG AACGACCGCT TCTACGCCGA CTACAAGGCC GGCAAGCTCG ACATCCACGC GTACCTGAGC GCGATGCTCA CGCCGCTCGC GAAGTATTCG CGCGCGCAGC TCGCGCAGTG GCACGACCGG TACATGCACG AAGTGATCCG GCCGGCGATG CTGCCCGCCG CGATCGAGCT CGTGCGCCGG CATCAGGACG CGGGCGACCT CTGCTGCATC GTCACCGCGA CGAACGAATT CATCACGCGT CCGATCGCGA CCGCGTTCGG CGTCGACACG CTGATCGCCT GCGAAGTGGA AACCGTCGAC GGCCATCCCG ATTCCGCGTT CACCGGCCGC CCGACGGGCA CGCCGAGCTA CCGCGAAGGC AAGATCACCC GCACGCAGGC GTGGCTCGCA TCGCTCGGCA AGCGCTGGGA CGATTTCGAC CGCAGCTATT TCTACAGCGA TTCGCACAAC GACATTCCGC TCCTCGAAAA AGTCACCGAC CCGATCGCGA CCAATCCCGA CGACACGCTG CGCGCATACG CACGCGAGCA CGGCTGGCGC ATCCTCGACC TCTTCCAACC GTCGTGA
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Protein sequence | MTNLALFDLD HTLIPTDSDH EWGRFMVRLG IVDADSFSRQ NDRFYADYKA GKLDIHAYLS AMLTPLAKYS RAQLAQWHDR YMHEVIRPAM LPAAIELVRR HQDAGDLCCI VTATNEFITR PIATAFGVDT LIACEVETVD GHPDSAFTGR PTGTPSYREG KITRTQAWLA SLGKRWDDFD RSYFYSDSHN DIPLLEKVTD PIATNPDDTL RAYAREHGWR ILDLFQPS
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