| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2416 |
|---|
| Symbol | |
|---|
| ID | 7317118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 2561139 |
|---|
| End bp | 2561798 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643617320 |
|---|
| Product | HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|---|
| Protein accession | YP_002514481 |
|---|
| Protein GI | 220935582 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACATTGG CCATCTTCGA TCTGGACAAT ACCCTGCTCT CAGGGGACAG CGACTACGAA
TGGGGCCGCT TCCTGGTGGA ACTGGGGGTG GTGGATGCCG AGACCTACGA GGCCGCCAAT
CGGGCGTTCT ACGAACAGTA CAAGGCCGGC ACGCTGGATA TCCGGGAGTT CTGCCGCTTC
GCCTTCCGCC CCCTGGCCAG CCACGACCTG GCCACCCTGG AAGGCTGGCG CAGTCGCTTT
CTGGCCGAGC GCGTCGAACC CCTGGTGCTG CCCGCCGCGG AGGCACTGCT GGCCAGACAC
CGGGACGACG GCGATACCCT CATGATCATC ACCGCCACCA ACCGCTTCAT CACTGCCCCC
ATCGCCGAAC GCCTGGGGGT GCCCCACCTG CTGGCCACGG AACCGGAATT GCGGGACGGT
CGGTACACGG GAGAACTGGC GGGTGTGCCC TGTTTCCAGG AGGGCAAGGT GCTGCGCCTG
GAGACCTGGC TCAAGGAACA CGGCGAGACC CTGGCGGGCA GCTGGTTCTA CAGCGACTCC
CACAACGACA TCCCGCTGCT GGAGCGGGTG GATCACCCGG TGGTGGTGGA TGGGGATGTG
AAGCTCACCG ACCATGCCCA GGAAAAGGGC TGGCCGATGA TCTCACTGAG ATACGTCTGA
|
|---|
| Protein sequence | MTLAIFDLDN TLLSGDSDYE WGRFLVELGV VDAETYEAAN RAFYEQYKAG TLDIREFCRF
AFRPLASHDL ATLEGWRSRF LAERVEPLVL PAAEALLARH RDDGDTLMII TATNRFITAP
IAERLGVPHL LATEPELRDG RYTGELAGVP CFQEGKVLRL ETWLKEHGET LAGSWFYSDS
HNDIPLLERV DHPVVVDGDV KLTDHAQEKG WPMISLRYV
|
|---|
| |