| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5054 |
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| Symbol | |
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| ID | 5190925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5681921 |
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| End bp | 5682577 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589537 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001270356 |
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| Protein GI | 148550254 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGG CTTTATTCGA CCTGGACAAT ACCCTCCTCG GTGGCGACAG CGACCATGCC
TGGGGTGACT ATCTTTGCGA GCGCGGCATT CTCGACCCGG TCGCCTACAA GCAACGCAAC
GACAGCTTCT ACCAGGATTA CCTCAATGGC ACCCTGGACC TTCAGGCCTA CCTGGCCTTT
TCCATGGAAA TCCTGGCGGC AACACCCATG CCCCAACTCG ACGAATGGCA CCGCGATTTC
ATGCGCGACT GCATCGAGCC CATCGTCCTG CCCAAGGCCC TGGCCTTGCT GCAGCAGCAC
CGCGAGGCGG GCGACCAGCT GGTGATCATC ACCGCTACCA ACCGCTTCGT CACCGCACCA
ATCGCCCGGC GCCTGGGGGT GCGGGTGTTG CTGGCAACCG AATGCGAGGT GCGCGACGGC
CGCTACACCG GGCGTAGTAC CGATATACCG TGTTTCCGTG AAGGCAAAGT GACGCGGCTG
GAACGCTGGA TGCTGGAGAA CGGCTTTGAT CTTGAGGACA GCTACTTCTA TAGCGACTCG
ATGAATGACC TGCCGTTGTT GCAGCGGGTG ACGCATGCAG TGGCTGTGGA CCCGGCCCCG
GACCTGCGGG CCGAGGCGGA TAAGCGTGGA TGGCCGGTGA TCTCGCTGCG GGATTGA
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| Protein sequence | MRLALFDLDN TLLGGDSDHA WGDYLCERGI LDPVAYKQRN DSFYQDYLNG TLDLQAYLAF
SMEILAATPM PQLDEWHRDF MRDCIEPIVL PKALALLQQH REAGDQLVII TATNRFVTAP
IARRLGVRVL LATECEVRDG RYTGRSTDIP CFREGKVTRL ERWMLENGFD LEDSYFYSDS
MNDLPLLQRV THAVAVDPAP DLRAEADKRG WPVISLRD
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