| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4844 |
|---|
| Symbol | |
|---|
| ID | 3370394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5750644 |
|---|
| End bp | 5751300 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637655211 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_237909 |
|---|
| Protein GI | 66048068 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGG CTTTATTCGA CCTCGACAAC ACCCTTCTGG GCGGCGACAG CGATCACGCC
TGGGGCGATT ACCTGTGCCG GCGCGGGATC CTTGATGCCG CGACCTACAA AACCCGCAAC
GACGAGTTCT ATCAGGATTA CCTGGCCGGC ACGCTGAACA TGACCGACTA CCTGAATTTT
ACCCTGGAGA TTCTGGGCAA CACTGACATG GCGCAGCTCG AGCAGTGGCA TCGCGAGTTC
ATGCGCGACT GCATCGAACC GATGATGCTG CCCAAGGCGC TGGAATTGAT CGCCAAACAC
CGCGAGGCCG GCGACAAGCT GGTGGTGATT ACCGCCACCA ACCGCTTTGT GACGGCACCT
ATCGTGGCGC GACTGGGGAT CGATACCCTG CTGGCGACCG AATGCGAGAT GGCTGACGGC
CGCTATACCG GCCGCACCAC AGGTGTGCCC TGCTTCCGTG AAGGCAAGGT GACACGCCTC
AATCAGTGGC TGCAAGACAA CGCGTTCAGC CTTGAGGACA GCTATTTCTA CAGTGATTCG
ATGAACGACC TGCCTCTGCT GGAGCAGGTG GCCAACCCGG TTGCGGTCGA TCCGGACGAT
AAATTGCGTG CCGAAGCCGA GCGACGCGGC TGGCCGGTAA TTACCCTGCG TCACTGA
|
|---|
| Protein sequence | MRLALFDLDN TLLGGDSDHA WGDYLCRRGI LDAATYKTRN DEFYQDYLAG TLNMTDYLNF
TLEILGNTDM AQLEQWHREF MRDCIEPMML PKALELIAKH REAGDKLVVI TATNRFVTAP
IVARLGIDTL LATECEMADG RYTGRTTGVP CFREGKVTRL NQWLQDNAFS LEDSYFYSDS
MNDLPLLEQV ANPVAVDPDD KLRAEAERRG WPVITLRH
|
|---|
| |