Gene Sked_33380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33380 
Symbol 
ID8634971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3718916 
End bp3719713 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content72% 
IMG OID 
ProductHAD-superfamily subfamily IB hydrolase, TIGR01490 
Protein accessionYP_003316067 
Protein GI269796612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.156612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACGTC CGGCGGGTCG GCGCACCGCG GCGTTCTTCG ACCTCGACAA GACGATCATC 
GCGACGTCGT CGACTGCGGC GTTCTCCCGG CCGTTCCTCG CCGGAGGGCT GCTGTCCCGC
GGCGCCGTGC TGCGTGCGGC CTACGCGCAC TTCCTGTTCC TCGTGGGCAG CGCCGACGCG
GACCAGACCG AGCGGATGCG CGCGCACCTG TCGTCCATGG TGACCGGCTG GCCGGTCGAG
CAGGTCTCAT CGATCGTGGC CGAGACCCTG CACGAGCTCA TCGACCCCTA CGTGTACTCC
GAGGCGGTCG AGCTCATCGC GCAGCACCGT GCCGCCGGTC GCGACGTGGT GGTCGTGTCT
GCCTCGGGCG CCGAGCTCGT CGAGCCGATC GCCGCGATGC TCGGCGCCGA CCACGCGGTC
TCGACCCGCA TGGAGGTCGT CGACGGTCGG TACACGGGTG GGATCGACTT CTACGCCTAC
GGGGACAACA AGGCCGCGGA GATCTACCGG CTCGCCGCGG AGTACGGCTA CGACCTCGAC
GGTTCCTACG CCTACTCCGA CTCGATCACC GACGCCCCGA TGCTCGACTC GGTCGGGCAC
GGTTTCGCCG TCAACCCTGA CCGCACGCTG CGTCGCCTCG CCGCCGAGGA GGGCTGGGGC
GTGCTCACCT TCAACCGGCC CGTCGCGCTC CGCCGGGCCA TCTCCCCCCG TGCGTCGGTC
GCCGCGGGAG CCGCGGTGCT GGTGGGGACC GGTGCCGCCC TCGTCCTCTG GCGCGCGCTG
CGCCGACGGG GCGCCTGA
 
Protein sequence
MRRPAGRRTA AFFDLDKTII ATSSTAAFSR PFLAGGLLSR GAVLRAAYAH FLFLVGSADA 
DQTERMRAHL SSMVTGWPVE QVSSIVAETL HELIDPYVYS EAVELIAQHR AAGRDVVVVS
ASGAELVEPI AAMLGADHAV STRMEVVDGR YTGGIDFYAY GDNKAAEIYR LAAEYGYDLD
GSYAYSDSIT DAPMLDSVGH GFAVNPDRTL RRLAAEEGWG VLTFNRPVAL RRAISPRASV
AAGAAVLVGT GAALVLWRAL RRRGA