| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0678 |
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| Symbol | |
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| ID | 6178163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 766017 |
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| End bp | 766694 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641680425 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001807390 |
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| Protein GI | 172059738 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.161467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAATC TGGCACTCTT TGACCTCGAT CACACGCTGA TCCCGACCGA CAGCGACCAC
GAATGGGGTC GCTTCATGGT GAAGCTCGGC ATCGTCGACG CGGAAAGCTT CTCGCGTCAG
AACGATCAGT TCTTCGCCGA CTACAAGGCC GGCAAGCTCG ACATCCATGC GTATCTGTGC
GCGATGCTCA CGCCGCTCGC GAAGTACTCG CGCGCGCAGC TCGCCGAATG GCACGAGCAG
TACATGCACG AGGTGATCCG CCCCGCGATG ACGCCCGCCG CGCTCGAACT CGTGCGCAAG
CACCTCGATG CCGGCGATCT GTGTTGCGTC GTGACGGCGA CCAACGAATT CATCACGCGT
CCGATCGCGA CCGCGTTCGG CGTCGACACG CTGATCGCGT GCGAGGTCGA AACGACCGAC
GGGCACCCCG ACTCGCCGTA CACGGGCCGG CCGACCGGCA CGCCGAGCTA TCGCGAAGGC
AAGATCGTGC GCACCGAAGC ATGGCTCGCG TCGCTCGGCA AGCACTGGGA CGACTTCGAA
CACAGCTACT TCTACAGCGA CTCGCACAAC GACATCCCGT TGCTCGAGAA AGTCACCGAC
CCGATCGCGA CCAACCCCGA CGACACGCTG CGTGCACATG CAAGCAACCG CGGCTGGCGC
ATCCTGGATC TCTTCTGA
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| Protein sequence | MTNLALFDLD HTLIPTDSDH EWGRFMVKLG IVDAESFSRQ NDQFFADYKA GKLDIHAYLC
AMLTPLAKYS RAQLAEWHEQ YMHEVIRPAM TPAALELVRK HLDAGDLCCV VTATNEFITR
PIATAFGVDT LIACEVETTD GHPDSPYTGR PTGTPSYREG KIVRTEAWLA SLGKHWDDFE
HSYFYSDSHN DIPLLEKVTD PIATNPDDTL RAHASNRGWR ILDLF
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