Gene TK90_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0395 
Symbol 
ID8806130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp412441 
End bp413127 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content67% 
IMG OID 
ProductHAD-superfamily subfamily IB hydrolase, TIGR01490 
Protein accessionYP_003459646 
Protein GI289207580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.771269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.534217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGG CCCTGTTCGA CCTCGACAAT ACCCTGCTCG CCGGCGACAG CGATCACGCC 
TGGAACCAGT TCCTGGCCGA GGTGGGTGCC GTGCACCCGA CCTGTCACGC CGAGACCAAT
GACCGCTTCT ATCAGGAGTA TGTCGCAGGG ACCCTCGACA TCCACGAGTT CTGCCGCTTC
GCGTTCAGCC CGCTGGCCGA GCACCCGCGC GCGCAACTGG AACAATGGCG GGAGCAGTTC
ATCGAGACGC TGATCCGGCC GATGATCGCT CCGGGCGCCC AGCATCTGCT GGCCCGGCAC
CGGGAGGCCG GTGACGAGCT GGTGATCATC ACCGCGACCA ACCAGTTCGT AACCCAGCCG
ATCGCGGAGA TCCTCGACGT GGATCACCTG ATCGCCACCC TCGCGGAAGA GCGCGAGGAC
GGGGAGTTCA CCGGTGAACT GACGGGCGTG CCCTGCTTCC AGGAAGGCAA GATCGAGCGC
CTGCGCCAGT ACCTCGCGGA TCACCCGGAC CCCGAGGGCA CCATCACGCA GGCCAGCTTC
TACAGCGACT CGCGCAACGA CATCCCGCTG CTGGAGCAGG TCGGCCGCCC GGTGGCCGTG
GATCCCGACC CGACCCTGGC CGCGCACGCC CGGGAGCGTG GCTGGCCGGT GATCTCGCTG
CGCGAGCCCG AAGGCTCGGT CAGCTGA
 
Protein sequence
MNLALFDLDN TLLAGDSDHA WNQFLAEVGA VHPTCHAETN DRFYQEYVAG TLDIHEFCRF 
AFSPLAEHPR AQLEQWREQF IETLIRPMIA PGAQHLLARH REAGDELVII TATNQFVTQP
IAEILDVDHL IATLAEERED GEFTGELTGV PCFQEGKIER LRQYLADHPD PEGTITQASF
YSDSRNDIPL LEQVGRPVAV DPDPTLAAHA RERGWPVISL REPEGSVS