Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0395 |
Symbol | |
ID | 8806130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 412441 |
End bp | 413127 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | HAD-superfamily subfamily IB hydrolase, TIGR01490 |
Protein accession | YP_003459646 |
Protein GI | 289207580 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.771269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.534217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGG CCCTGTTCGA CCTCGACAAT ACCCTGCTCG CCGGCGACAG CGATCACGCC TGGAACCAGT TCCTGGCCGA GGTGGGTGCC GTGCACCCGA CCTGTCACGC CGAGACCAAT GACCGCTTCT ATCAGGAGTA TGTCGCAGGG ACCCTCGACA TCCACGAGTT CTGCCGCTTC GCGTTCAGCC CGCTGGCCGA GCACCCGCGC GCGCAACTGG AACAATGGCG GGAGCAGTTC ATCGAGACGC TGATCCGGCC GATGATCGCT CCGGGCGCCC AGCATCTGCT GGCCCGGCAC CGGGAGGCCG GTGACGAGCT GGTGATCATC ACCGCGACCA ACCAGTTCGT AACCCAGCCG ATCGCGGAGA TCCTCGACGT GGATCACCTG ATCGCCACCC TCGCGGAAGA GCGCGAGGAC GGGGAGTTCA CCGGTGAACT GACGGGCGTG CCCTGCTTCC AGGAAGGCAA GATCGAGCGC CTGCGCCAGT ACCTCGCGGA TCACCCGGAC CCCGAGGGCA CCATCACGCA GGCCAGCTTC TACAGCGACT CGCGCAACGA CATCCCGCTG CTGGAGCAGG TCGGCCGCCC GGTGGCCGTG GATCCCGACC CGACCCTGGC CGCGCACGCC CGGGAGCGTG GCTGGCCGGT GATCTCGCTG CGCGAGCCCG AAGGCTCGGT CAGCTGA
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Protein sequence | MNLALFDLDN TLLAGDSDHA WNQFLAEVGA VHPTCHAETN DRFYQEYVAG TLDIHEFCRF AFSPLAEHPR AQLEQWREQF IETLIRPMIA PGAQHLLARH REAGDELVII TATNQFVTQP IAEILDVDHL IATLAEERED GEFTGELTGV PCFQEGKIER LRQYLADHPD PEGTITQASF YSDSRNDIPL LEQVGRPVAV DPDPTLAAHA RERGWPVISL REPEGSVS
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