| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1432 |
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| Symbol | |
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| ID | 8323515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1497654 |
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| End bp | 1499966 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952564 |
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| Product | HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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| Protein accession | YP_003110029 |
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| Protein GI | 256372205 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.438652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGCGCG AGTCCTTGGC GGGTCGGTTG ATCTTCCTTA CGGGCGCGAC GGGCTTCCTC
GGGACGGCCA TCGTCGAGTC CGTTCTTCGG TTGCTCCCGG AGACTCGTGT TGCGGTCTTG
ATTCGACGCG GTCGTACGAC GAGCGCCGAG GAGCGCCTCC GTCGAGAGCT GCTTGGCAAC
AGCTGCTTCG ATCGACTCCG AGCCGAGCTC GGTCGGGATG CGTTTGCGGA CATGGCTGCT
CGTCGGGTCG TGCTCGTCGA GGGTGACGTT GGCCGTGATG GTCTCGGTCT CGACCCTGCG
GGACGGTCGG TGCTTGGCGC AGCCGACATC GTGATCCACT CCGCGGCGAC GGTGAGCTTC
GACGCGACAC TCGATGCTGC CGTCGAGATC AACCTGCTCG GGCCGGCGAG AGTGCTCGAG
GCGTACGAGC AGGCACGTGC CGAGGCCGAT CTCGCGCCAG GCCACTTCGT CGCCATCTCG
ACCGCCTACG TCGCCGGCTC GCGCAAGGGT GACGCACCCG AGGCGTCGCT CCGCACGCAG
CCGCACTATC CGGACGTGGA TTGGCGTGCG GAGGTCGAGG CTGCCAGGGC TCTGCGTCGA
GAGACGGAGC ATCGTTCTCG CGAGCCGGAG CGGCTCGAAA CGTTCCGTCG CAAGGCGCTG
GCGGAGCTCG GGGCTGCGGG GGTCGCGATC GTGGCCGAAC GCACCGAGCG CTTTCGACGC
GACTGGGTCC ATGAGCGTAT GGTCGAACTG GGTCGGGCGC GAGCGCAGAG CCTGGGATGG
CCGGACGCCT ACGCCATGAC GAAGGCGCTC GGGGAACGCG TCCTGGAGGA GCGCCGTCAG
CGCACCCCGG TGTCGGTCGT GCGCCCCTCG ATCATCGAGT CGAGCTACGC CGAGCCGCGA
CCGGGTTGGA TTCGAGGGTT CCGCATGGCG GAGCCCATCA TCATCTCGTT CGCGCGGGGG
CTGCTGCGCG ATTTCCCTGG GTCGGCCGAG ACGGTGGTCG ACGTGATCCC CGTGGACTTC
GTCGTCGGCG CGGTTCTCGT CGCCGCTGCT CATCCCCCCC GGGCGATGGC GTACTACCAC
GCGGCCTCGG GCACGAGGAA CCCGCTTCGT TACGAGGTGA TGGTCTCGCT CATCCGGCAG
TACTTCGCCG AACACCCGCT CTACGACGAC AAGGGCCAAG CCATCGCGAT ACCTTCGTGG
ACCTACCCAG CCAGAGGGGA GGTCGAACGC CGTCTCGAGC GCACCAGGCG GGCCGTCGGG
GCGGTGCTCG GCCTCCTGGG GCGGCTGCCG CTTCGCGGTC CCATGCTCTC GGCCCAAGAT
GGTCTCGTCG AGACGCAGGA CGCCCTCGAG CGGGCTCGTT CCTACGTCGA GCTCTACGGT
GCCTACGCCG AGTGCGAGGC GATGTACGGG TCCGAACGGC TCGTAGAACT CGTCTCCCTC
GCGAGCGCTG ACGACGGCGT GCTCGTCGAT CCGGCGGCCA TCGATTGGCG GCACTTCATC
CTCGACGTCC ACCTGCCGAG CGTGGTCGAG CACGCTCGCG CGCGCACGAA TCCCCGGCGC
GGTCCGCGAC GCTCCCGAGA CGACCGCCTA CGCGAGGGTC TGCTGCGCGG GCGACGCCTG
GCCGTGTTCG ATCTCGAGAA CACCTTGGTC GCAGCGAACG TGGTGGACTC GTTCGCCTTC
GTCGCGACCA GTGCGCTGCG CCCCGTGGAT CGGTTCGGGC TCGTCGCGAG CCTGCTCGCC
GAGGCGCCGA AGCTGTTGCG GCTCGACGGC CGCGACCGCT CCGACTTCCT CCGGTACTTC
TATCGTCGTT ACCGCGATGC GGATCCTGCC GAGCTTGCCA AGCTGGCTCC GGATCTCATG
ACGGGCTACC TCCTGCGCAA GACGTTCCCG GAGGGCCTCG CCAGAGTGCG GCAACATCGT
GCCGCCGGTC ATGTGACGGT CGGCGTCACC GGTGCGCTGC GCTTTGCGAT GGAGCCGTTC
CGCCCGCTGT TCGACGAGCT CATCGCCCTG GACATGCCTG AGAGGAACGG CCGCTTAAGT
GGTACGGTGC CCGGGACGCT GCCCATTGGG GAGGCACGAG CCGACCTCGT GCGTCAGCTC
GCGGCCCGCT ACGAGATCCC GCTCGCTGAC ACGATCGCCT ACGCAGACTC CACCAGTGAT
CTGCCCATGC TCGAAGCAGC GGGTACGGCG GTCGCGGTGA ATCCGGATGC GAAGCTGCGC
GCGCTTGCCA AGCGGCGGGG TTGGCTCATC GAGGAGTGGG AACGTGCCTC TGGGTTCCCG
TCGCTCATGC TGCCCATCGG AGGTCGTCGA TGA
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| Protein sequence | MLRESLAGRL IFLTGATGFL GTAIVESVLR LLPETRVAVL IRRGRTTSAE ERLRRELLGN
SCFDRLRAEL GRDAFADMAA RRVVLVEGDV GRDGLGLDPA GRSVLGAADI VIHSAATVSF
DATLDAAVEI NLLGPARVLE AYEQARAEAD LAPGHFVAIS TAYVAGSRKG DAPEASLRTQ
PHYPDVDWRA EVEAARALRR ETEHRSREPE RLETFRRKAL AELGAAGVAI VAERTERFRR
DWVHERMVEL GRARAQSLGW PDAYAMTKAL GERVLEERRQ RTPVSVVRPS IIESSYAEPR
PGWIRGFRMA EPIIISFARG LLRDFPGSAE TVVDVIPVDF VVGAVLVAAA HPPRAMAYYH
AASGTRNPLR YEVMVSLIRQ YFAEHPLYDD KGQAIAIPSW TYPARGEVER RLERTRRAVG
AVLGLLGRLP LRGPMLSAQD GLVETQDALE RARSYVELYG AYAECEAMYG SERLVELVSL
ASADDGVLVD PAAIDWRHFI LDVHLPSVVE HARARTNPRR GPRRSRDDRL REGLLRGRRL
AVFDLENTLV AANVVDSFAF VATSALRPVD RFGLVASLLA EAPKLLRLDG RDRSDFLRYF
YRRYRDADPA ELAKLAPDLM TGYLLRKTFP EGLARVRQHR AAGHVTVGVT GALRFAMEPF
RPLFDELIAL DMPERNGRLS GTVPGTLPIG EARADLVRQL AARYEIPLAD TIAYADSTSD
LPMLEAAGTA VAVNPDAKLR ALAKRRGWLI EEWERASGFP SLMLPIGGRR
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