| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5147 |
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| Symbol | |
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| ID | 1042578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5873287 |
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| End bp | 5873943 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148546 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | NP_747248 |
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| Protein GI | 26991823 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.416091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCTGG CTTTATTCGA CCTGGACAAT ACCCTCCTCG GTGGCGACAG CGACCATGCC
TGGGGTGACT ATCTTTGCGA GCGCGGCATT CTCGACCCGG TCGCCTACAA GCAACGCAAC
GACAGCTTCT ACCAGGATTA CCTCAATGGC ACCCTGGACC TGCAGGCCTA CCTGGCCTTT
TCCATGGAGA TCCTGGCGGC AACACCCATG GCCCGGCTCG ACGAGTGGCA CCGCGACTTC
ATGCGCGACT GCATCGAGCC CATCGTCCTG CCCAAGGCCC TGGCCTTGCT GCAGCAGCAC
CGCGAGGCGG GCGACCAGCT GGTGATCATC ACCGCTACCA ACCGCTTCGT CACCGCACCG
ATCGCCCGGC GCCTGGGGGT GCGGGTGTTG CTGGCAACCG AATGCGAGGT GCGCGACGGC
CGCTACACCG GGCGTAGTAC CGATATACCG TGTTTCCGTG AAGGCAAAGT GACGCGGCTG
GAGCGCTGGA TGCTGGAGAA CGGCTTTGAT CTTGAGGACA GCTACTTCTA CAGCGACTCG
ATGAATGACC TGCCGTTGTT GCAGCGGGTG ACGCATGCAG TGGCAGTGGA CCCGGCCCCG
GACCTGCGGG CCGAGGCGGA TAAGCGTGGG TGGCCGGTGA TCTCGCTGCG GGATTGA
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| Protein sequence | MRLALFDLDN TLLGGDSDHA WGDYLCERGI LDPVAYKQRN DSFYQDYLNG TLDLQAYLAF
SMEILAATPM ARLDEWHRDF MRDCIEPIVL PKALALLQQH REAGDQLVII TATNRFVTAP
IARRLGVRVL LATECEVRDG RYTGRSTDIP CFREGKVTRL ERWMLENGFD LEDSYFYSDS
MNDLPLLQRV THAVAVDPAP DLRAEADKRG WPVISLRD
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