| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5286 |
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| Symbol | |
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| ID | 1186971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6012091 |
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| End bp | 6012747 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396605 |
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| Product | HAD-superfamily hydrolase |
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| Protein accession | NP_795017 |
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| Protein GI | 28872398 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTGG CTTTATTCGA CCTCGACAAC ACGCTTCTGG GCGGCGACAG CGATCACGCC
TGGGGCGATT ACCTGTACCA GCGTGGCATC CTCGATGCCG CCACGTACAA AAGCCGCAAC
GACGAGTTTT ATCAGGATTA CCTGGCCGGT ACGCTGAACA TGACCGACTA CCTGAATTTT
ACGCTGGAGA TTCTGGGCAA CACTGACATG GCGCAACTGC AGGAGTGGCA CCGCGAGTTC
ATGCGCGACT GCATCGAGCC GATCATGCTG CCCAAGGCGC TGGAGCTGAT CGCCAAACAC
CGCGAGGCCG GCGACAAACT GGTGGTGATT ACTGCGACCA ATCGCTTTGT GACGGCACCG
ATCGTGGCGC GCCTGGGGAT TGAAACGCTG CTGGCGACCG AGTGCGAGAT GGTTGACGGG
CGCTACACCG GCCGCACGAC GGGCGTTCCA TGCTTCCGTG AGGGTAAGGT GACACGTCTC
AATCAGTGGC TGGAAGACAA TGCGTTCAGC CTTGAAGACA GCTATTTCTA CAGCGACTCG
ATGAATGACC TGCCGCTGCT GGAGCAGGTC GCCAACCCGG TCGCGGTAGA CCCGGACGCC
AGACTGCGTG CAGAAGCCGA GCAGCGCGGC TGGCCGGTGA TTACCCTGCG CAGTTGA
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| Protein sequence | MRLALFDLDN TLLGGDSDHA WGDYLYQRGI LDAATYKSRN DEFYQDYLAG TLNMTDYLNF
TLEILGNTDM AQLQEWHREF MRDCIEPIML PKALELIAKH REAGDKLVVI TATNRFVTAP
IVARLGIETL LATECEMVDG RYTGRTTGVP CFREGKVTRL NQWLEDNAFS LEDSYFYSDS
MNDLPLLEQV ANPVAVDPDA RLRAEAEQRG WPVITLRS
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