285 homologs were found in PanDaTox collection
for query gene Gbro_0515 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_0515  HAD-superfamily subfamily IB hydrolase, TIGR01490  100 
 
 
289 aa  588  1e-167  Gordonia bronchialis DSM 43247  Bacteria  normal  0.589704  n/a   
 
 
-
 
NC_014158  Tpau_3910  HAD-superfamily subfamily IB hydrolase  60.75 
 
 
284 aa  325  6e-88  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0590  HAD-superfamily subfamily IB hydrolase, TIGR01490  60.89 
 
 
280 aa  310  1e-83  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.841556  n/a   
 
 
-
 
NC_009565  TBFG_13691  hypothetical protein  64.63 
 
 
287 aa  305  8.000000000000001e-82  Mycobacterium tuberculosis F11  Bacteria  normal  0.148419  normal  0.360878 
 
 
-
 
NC_009077  Mjls_5194  HAD family hydrolase  65 
 
 
285 aa  303  2.0000000000000002e-81  Mycobacterium sp. JLS  Bacteria  normal  0.421915  hitchhiker  0.000238579 
 
 
-
 
NC_008146  Mmcs_4807  HAD family hydrolase  65 
 
 
285 aa  303  2.0000000000000002e-81  Mycobacterium sp. MCS  Bacteria  normal  0.0376166  n/a   
 
 
-
 
NC_008705  Mkms_4893  HAD family hydrolase  65 
 
 
285 aa  303  2.0000000000000002e-81  Mycobacterium sp. KMS  Bacteria  normal  normal  0.271167 
 
 
-
 
NC_008726  Mvan_5423  HAD family hydrolase  64.55 
 
 
313 aa  302  4.0000000000000003e-81  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.988036 
 
 
-
 
NC_013093  Amir_0274  HAD-superfamily subfamily IB hydrolase, TIGR01490  58.4 
 
 
270 aa  301  7.000000000000001e-81  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1382  HAD family hydrolase  63.18 
 
 
307 aa  295  5e-79  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0503045  normal  0.084913 
 
 
-
 
NC_013530  Xcel_0320  HAD-superfamily subfamily IB hydrolase, TIGR01490  60.91 
 
 
258 aa  285  4e-76  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.369561  n/a   
 
 
-
 
NC_013159  Svir_35940  HAD-superfamily subfamily IB hydrolase, TIGR01490  55.77 
 
 
280 aa  282  4.0000000000000003e-75  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.330222  normal  0.156171 
 
 
-
 
NC_013521  Sked_33380  HAD-superfamily subfamily IB hydrolase, TIGR01490  54.98 
 
 
265 aa  280  2e-74  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.156612  normal 
 
 
-
 
NC_008699  Noca_0362  HAD family hydrolase  57.71 
 
 
289 aa  271  8.000000000000001e-72  Nocardioides sp. JS614  Bacteria  hitchhiker  0.00108694  n/a   
 
 
-
 
NC_013131  Caci_0054  HAD-superfamily subfamily IB hydrolase, TIGR01490  54.22 
 
 
281 aa  265  7e-70  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2800  HAD-superfamily subfamily IB hydrolase, TIGR01490  60.09 
 
 
275 aa  265  8.999999999999999e-70  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00283353 
 
 
-
 
NC_013947  Snas_6363  HAD-superfamily subfamily IB hydrolase TIGR01490  58.26 
 
 
272 aa  263  3e-69  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.499829  normal 
 
 
-
 
NC_009380  Strop_4041  HAD family hydrolase  56.09 
 
 
267 aa  257  1e-67  Salinispora tropica CNB-440  Bacteria  normal  0.946878  normal 
 
 
-
 
NC_009953  Sare_4432  HAD family hydrolase  56.09 
 
 
270 aa  256  2e-67  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000343409 
 
 
-
 
NC_013174  Jden_2226  HAD-superfamily subfamily IB hydrolase, TIGR01490  50.61 
 
 
282 aa  237  1e-61  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.98055 
 
 
-
 
NC_013124  Afer_1925  HAD-superfamily subfamily IB hydrolase, TIGR01490  50.92 
 
 
273 aa  204  2e-51  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2740  HAD-superfamily subfamily IB hydrolase, TIGR01490  36.94 
 
 
288 aa  149  8e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0297875 
 
 
-
 
NC_013739  Cwoe_4644  HAD-superfamily subfamily IB hydrolase, TIGR01490  37.34 
 
 
286 aa  140  3e-32  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.460145 
 
 
-
 
NC_007333  Tfu_2722  HAD family hydrolase  37.14 
 
 
305 aa  133  3.9999999999999996e-30  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4355  HAD-superfamily subfamily IB hydrolase, TIGR01490  36.49 
 
 
262 aa  132  6e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.571582 
 
 
-
 
NC_013131  Caci_8329  HAD-superfamily subfamily IB hydrolase, TIGR01490  35.19 
 
 
266 aa  131  1.0000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.119426  normal 
 
 
-
 
NC_012669  Bcav_3259  HAD-superfamily subfamily IB hydrolase, TIGR01490  35.43 
 
 
263 aa  127  2.0000000000000002e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.107889  normal  0.303521 
 
 
-
 
NC_013530  Xcel_0438  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.19 
 
 
268 aa  125  7e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3299  HAD family hydrolase  33.8 
 
 
272 aa  124  1e-27  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3098  HAD-superfamily subfamily IB hydrolase, TIGR01490  34.08 
 
 
272 aa  123  4e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_0916  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.93 
 
 
297 aa  122  7e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0418  HAD family hydrolase  35.81 
 
 
312 aa  120  1.9999999999999998e-26  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00884178 
 
 
-
 
NC_009380  Strop_0348  HAD family hydrolase  36.74 
 
 
290 aa  120  1.9999999999999998e-26  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6135  HAD family hydrolase  34.98 
 
 
294 aa  121  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  normal  0.415462 
 
 
-
 
NC_013521  Sked_07130  HAD-superfamily subfamily IB hydrolase, TIGR01490  32.02 
 
 
311 aa  118  9e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.371793 
 
 
-
 
NC_014165  Tbis_0255  HAD-superfamily hydrolase  33.04 
 
 
286 aa  117  1.9999999999999998e-25  Thermobispora bispora DSM 43833  Bacteria  normal  0.185675  normal 
 
 
-
 
NC_013595  Sros_0542  Phosphoserine phosphatase-like protein  33.05 
 
 
289 aa  117  1.9999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.260991 
 
 
-
 
NC_009565  TBFG_10516  phosphoserine phosphatase serB1  35.27 
 
 
373 aa  116  3.9999999999999997e-25  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0813  HAD family hydrolase  31.67 
 
 
228 aa  115  6e-25  Marinobacter aquaeolei VT8  Bacteria  decreased coverage  0.00498763  n/a   
 
 
-
 
NC_004578  PSPTO_5286  HAD-superfamily hydrolase  32.56 
 
 
218 aa  115  8.999999999999998e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1270  HAD family hydrolase  32.87 
 
 
217 aa  115  1.0000000000000001e-24  Pseudomonas putida W619  Bacteria  normal  normal  0.0449796 
 
 
-
 
NC_013510  Tcur_4446  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.93 
 
 
290 aa  115  1.0000000000000001e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1214  HAD family hydrolase  35.71 
 
 
225 aa  113  3e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0597827  normal 
 
 
-
 
NC_007005  Psyr_4844  HAD family hydrolase  32.16 
 
 
218 aa  111  1.0000000000000001e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6738  HAD-superfamily subfamily IB hydrolase, TIGR01490  34.56 
 
 
294 aa  112  1.0000000000000001e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0490  HAD family hydrolase  33.04 
 
 
297 aa  111  1.0000000000000001e-23  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6034  HAD-superfamily subfamily IB hydrolase, TIGR01490  34.58 
 
 
222 aa  111  2.0000000000000002e-23  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0481  HAD family hydrolase  33.03 
 
 
295 aa  110  2.0000000000000002e-23  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1226  HAD-superfamily subfamily IB hydrolase, TIGR01490  35.27 
 
 
225 aa  110  3e-23  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1167  HAD family hydrolase  35.27 
 
 
225 aa  110  3e-23  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1328  HAD-superfamily subfamily IB hydrolase, TIGR01490  35.27 
 
 
225 aa  109  4.0000000000000004e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1313  HAD family hydrolase  31.94 
 
 
217 aa  109  5e-23  Pseudomonas putida GB-1  Bacteria  normal  normal  0.448818 
 
 
-
 
NC_009439  Pmen_4219  HAD family hydrolase  32.87 
 
 
217 aa  109  5e-23  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4585  HAD-superfamily subfamily IB hydrolase, TIGR01490  34.1 
 
 
306 aa  108  9.000000000000001e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.601592  n/a   
 
 
-
 
NC_013947  Snas_6219  HAD-superfamily subfamily IB hydrolase TIGR01490  33.05 
 
 
289 aa  108  1e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0346  XRE family transcriptional regulator  30.88 
 
 
218 aa  105  6e-22  Saccharophagus degradans 2-40  Bacteria  normal  0.923957  normal  0.0904875 
 
 
-
 
NC_013159  Svir_02790  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.48 
 
 
323 aa  105  7e-22  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0069  HAD family hydrolase  32.72 
 
 
295 aa  105  8e-22  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0248353  normal 
 
 
-
 
NC_009512  Pput_3998  HAD family hydrolase  31.48 
 
 
217 aa  105  9e-22  Pseudomonas putida F1  Bacteria  normal  0.050869  normal  0.239622 
 
 
-
 
NC_013440  Hoch_3628  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.33 
 
 
232 aa  105  1e-21  Haliangium ochraceum DSM 14365  Bacteria  normal  0.856585  hitchhiker  0.00143877 
 
 
-
 
NC_002947  PP_1721  HAD superfamily hydrolase  31.48 
 
 
217 aa  104  2e-21  Pseudomonas putida KT2440  Bacteria  normal  0.566146  normal  0.0514647 
 
 
-
 
NC_008463  PA14_04380  hypothetical protein  32.42 
 
 
217 aa  104  2e-21  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1870  hypothetical protein  34.26 
 
 
216 aa  103  3e-21  Pseudomonas aeruginosa PA7  Bacteria  normal  0.531495  n/a   
 
 
-
 
NC_010322  PputGB1_5200  HAD family hydrolase  30.88 
 
 
218 aa  103  4e-21  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0193  HAD family hydrolase  30.8 
 
 
518 aa  103  4e-21  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0459706  normal 
 
 
-
 
NC_009656  PSPA7_0428  hypothetical protein  31.96 
 
 
217 aa  102  1e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  0.469146  n/a   
 
 
-
 
NC_009077  Mjls_0667  HAD family hydrolase  33.49 
 
 
300 aa  101  1e-20  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0674  HAD family hydrolase  33.49 
 
 
300 aa  101  1e-20  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0687  HAD family hydrolase  33.49 
 
 
300 aa  101  1e-20  Mycobacterium sp. KMS  Bacteria  normal  normal  0.164292 
 
 
-
 
NC_002977  MCA2087  HAD family hydrolase  30.56 
 
 
220 aa  100  4e-20  Methylococcus capsulatus str. Bath  Bacteria  hitchhiker  0.00266008  n/a   
 
 
-
 
NC_011901  Tgr7_2416  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.36 
 
 
219 aa  100  4e-20  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0318  HAD family hydrolase  30.88 
 
 
218 aa  99.4  6e-20  Pseudomonas putida W619  Bacteria  normal  normal  0.13474 
 
 
-
 
NC_008148  Rxyl_2112  HAD family hydrolase  33.78 
 
 
750 aa  99.4  6e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0991  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.86 
 
 
218 aa  98.6  1e-19  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4653  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.04 
 
 
493 aa  98.2  1e-19  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5002  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.42 
 
 
488 aa  98.6  1e-19  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0886  HAD family hydrolase  32.19 
 
 
227 aa  98.6  1e-19  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0665  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.49 
 
 
295 aa  97.8  2e-19  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.406953  n/a   
 
 
-
 
NC_009664  Krad_0614  HAD-superfamily subfamily IB hydrolase, TIGR01490  34.8 
 
 
255 aa  96.7  4e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.160629  normal  0.0475682 
 
 
-
 
NC_008726  Mvan_0843  HAD family hydrolase  31.16 
 
 
301 aa  96.7  4e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.163877  normal  0.772835 
 
 
-
 
NC_008340  Mlg_0426  HAD family hydrolase  30.23 
 
 
231 aa  96.3  5e-19  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0139155 
 
 
-
 
NC_008463  PA14_21900  HAD-superfamily hydrolase  40.77 
 
 
192 aa  96.3  5e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00000205565 
 
 
-
 
NC_002947  PP_5147  HAD superfamily hydrolase  35.97 
 
 
218 aa  95.9  6e-19  Pseudomonas putida KT2440  Bacteria  normal  normal  0.416091 
 
 
-
 
NC_007484  Noc_2017  HAD family hydrolase  27.48 
 
 
242 aa  96.3  6e-19  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_5054  HAD family hydrolase  35.17 
 
 
218 aa  96.3  6e-19  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_48250  HAD-superfamily hydrolase subfamily IB, PSPase-like protein  29.86 
 
 
217 aa  95.9  8e-19  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2564  HAD family hydrolase  29.2 
 
 
570 aa  95.1  1e-18  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.341145  normal  0.242767 
 
 
-
 
NC_007005  Psyr_1601  HAD family hydrolase  30.09 
 
 
217 aa  95.1  1e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0403422 
 
 
-
 
NC_007492  Pfl01_5379  HAD family hydrolase  34.78 
 
 
218 aa  95.1  1e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.396939  normal  0.0228377 
 
 
-
 
NC_012791  Vapar_3061  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.19 
 
 
222 aa  94.4  2e-18  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1010  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.24 
 
 
352 aa  94.7  2e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  0.784708  n/a   
 
 
-
 
NC_009654  Mmwyl1_3749  HAD family hydrolase  27.91 
 
 
218 aa  93.6  3e-18  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.045267 
 
 
-
 
NC_004578  PSPTO_3883  HAD-superfamily hydrolase  36.3 
 
 
193 aa  93.6  4e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.91203  n/a   
 
 
-
 
NC_009439  Pmen_1327  HAD family hydrolase  30.23 
 
 
217 aa  92.4  7e-18  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00757114  normal 
 
 
-
 
NC_009338  Mflv_3285  HAD family hydrolase  27.71 
 
 
249 aa  92.4  7e-18  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.651915 
 
 
-
 
NC_011206  Lferr_0902  HAD-superfamily subfamily IB hydrolase, TIGR01490  37.58 
 
 
230 aa  92.4  8e-18  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.101359  normal 
 
 
-
 
NC_011761  AFE_0756  HAD-superfamily subfamily IB hydrolase, TIGR01490  37.58 
 
 
230 aa  92.4  8e-18  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.168454  n/a   
 
 
-
 
NC_008726  Mvan_4075  HAD family hydrolase  29.06 
 
 
525 aa  91.3  2e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.588653 
 
 
-
 
NC_008699  Noca_1998  HAD family hydrolase  31.6 
 
 
799 aa  91.3  2e-17  Nocardioides sp. JS614  Bacteria  normal  0.15184  n/a   
 
 
-
 
NC_008463  PA14_49620  phosphoserine phosphatase  31.63 
 
 
217 aa  89.7  5e-17  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00503624  normal 
 
 
-
 
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