| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12860 |
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| Symbol | |
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| ID | 8395177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1475984 |
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| End bp | 1476685 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644986042 |
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| Product | HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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| Protein accession | YP_003143662 |
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| Protein GI | 257063990 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0281228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGG AACCCCTGCA TAAAATCGCC GCCTTCGACT TCGACGGAAC GCTCATCCAA
GGGAACTCCC CGGTTCTACT TGTGCGTTAC CTGCAGAAAC GCGGCATGCT GGGCAAGCGC
GTCATCGGCA AGATCCTCGC GTGGGCGGCG GCCTACAAGC TGCGCCTGCC GCAGAACGAG
GCTTGGGTCC GCGGTCTGGT GTTCACGGCG TTCGAAGGTC GTCCCCAGGT GGAGGTCGAC
GCGTTCCTGC GCGATTTCTA CGACGATGTC ATCCTGGCTC AGAAGCGCTT CCGTCCGGCG
GCCGACGCGG CCATCAAGCT GCTCAAGAGT CGCGGCGTCG AGGTGCTCGT GGTGTCGGCA
ACCTTCGATC CCATCGTCCA ACGCGCACAC GAGCTGCACG ACTTCGACAA GGTCATCTGC
ACCAAGATGA AAGTGGACCA CAACGGCAAC TACACCATCT GGGTGGACGG CCCCTGCATC
GAAGGGTACG AAAAAGTCAA AGCCATCAGA AAGTACGGCG ACAAGACCTA CGGCAAGGGC
AACTGGGAGC TGGTCGCGGC ATTCGGCGAC CACCATTCCG ACCGCCCCAT GCTGTCCATG
GCGAAGGAGC CCTACGCCAT CAGCCCCGAC AACCCGCTGC GTCGCGAAGC GGCCCGCAGG
GGTTGGACCA TTCTGGATTG GGATATCGAC GTCGAGAAGT AG
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| Protein sequence | MTQEPLHKIA AFDFDGTLIQ GNSPVLLVRY LQKRGMLGKR VIGKILAWAA AYKLRLPQNE
AWVRGLVFTA FEGRPQVEVD AFLRDFYDDV ILAQKRFRPA ADAAIKLLKS RGVEVLVVSA
TFDPIVQRAH ELHDFDKVIC TKMKVDHNGN YTIWVDGPCI EGYEKVKAIR KYGDKTYGKG
NWELVAAFGD HHSDRPMLSM AKEPYAISPD NPLRREAARR GWTILDWDID VEK
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