| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2094 |
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| Symbol | |
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| ID | 3905621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2461827 |
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| End bp | 2462507 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879429 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_481195 |
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| Protein GI | 86740795 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.07906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATCG ATCCCGCCCG GATCGCGTTC TTCGACGTCG ACGAAACACT CATCACCGTC
AAGGGGATGC TCAGTTTTCT GGAGTTCCAC CTCGGCGCGC CGGACCGGTA CCGGCAGATC
GCGGACCGGT TGCACCGGCT CGCGGCCGAC GGGGTGCCAC GCGGGGAGAC CAACCGGCTC
TATTACGAGG TCTTCGCTGG CCAGCGGGAG ACCGAGGTGG CCGCAAGCGG CCGGCGGTGG
TTCCAACAGG AGATGGTGGG GGGCTCGCTC TTCCACGGCG AGCTGGTGCG GGTGCTGCGC
CGACTCCAGG CCGCCGGGAC GATCATCGTC CTGGTGTCGG GATCGTTCTC GGCCTGCCTG
GACCCGATCG CGGAACACCT CGGGGCGGAT CAGGTGCTCG GTACGGTCCC CGAAGTCCGT
GCCGGCCGGT ACACCGGCCG GGTGGTCCGC ACCGTCATCG GTGAGGGCAA GGCCACCGCG
GCCCGGGCGT TGCTCGCCGA GTTCGGCGTC GACGGGCGGC TCTGCGTCGC CTACGGCGAT
CACTCCTCGG ACCTGCCGAT GCTCGCGGCC GTGGGCCACG CCGGCGTGGT CGGACAGGAC
CCGGTTCTCC TCGCCCATGC GGCCGAGCGC GGCTGGGACC TTCTTCCCGG CATTCCGACA
CGAGGCAATG GGAAGGCATG A
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| Protein sequence | MGIDPARIAF FDVDETLITV KGMLSFLEFH LGAPDRYRQI ADRLHRLAAD GVPRGETNRL
YYEVFAGQRE TEVAASGRRW FQQEMVGGSL FHGELVRVLR RLQAAGTIIV LVSGSFSACL
DPIAEHLGAD QVLGTVPEVR AGRYTGRVVR TVIGEGKATA ARALLAEFGV DGRLCVAYGD
HSSDLPMLAA VGHAGVVGQD PVLLAHAAER GWDLLPGIPT RGNGKA
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