Gene Bcav_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3259 
Symbol 
ID7861731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3614319 
End bp3615110 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content73% 
IMG OID643867359 
ProductHAD-superfamily subfamily IB hydrolase, TIGR01490 
Protein accessionYP_002883264 
Protein GI229821738 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.107889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.303521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGCCG CCGACCGACC CGCCGTGGCG TTCTTCGACG TCGACAACAC GGTGATCCGC 
GGTGCGAGCG CCTACCACCT CGCGCGCGAG CTGTACCGCC GGCGCTTCTT CACCGCCTGG
GACATCCTGT GGTTCGGGGC CCACGCGTTC GCGTACTTCC TGTTCGGGGA GAACAACGTC
CGGATCCAGA AGGTGCGACG GCGCGCGCTG GACATCATCG CCGGCCGCAC CGAGGCCGAG
ATGATCTCGA TCGGCGAGGA CGTCTACGAC CAGGTCCTCG GCAGCCGGGT GTTCCCCGGT
GCCCGCGCGC TCATCGGGGC GCACCTGGCC GCCGGTCACG AGGTCTGGCT CGTCACCGCC
ACGCCCCGCG AGATCGGCGA CCTCATCGCC CGGCGTCTCG GCGCCACCGG CGCGGTGGGC
ACCGTCGCCG AGTCGCGCGA CGGGATCTAC ACCGGGCGAC TTGTCGGCGA CATGATGCAC
GGGGAGCACA AGGCGGACGC CGTGCGCGAG ATCGCGTCCC GGGCCGGCGT GGAGCTCGAG
GACTGCTCCG CATACGGCGA CTCCATCAAC GACGTCCCCA TGCTGTCGAT CGTCGGGCAC
CCGTGCGCCA TCAACCCGGA CCCGAGGCTC CGGCTGCACT GCGCCGGCAC GGGCTGGCCG
GTCCGCGACT TCCGCCGCCG GAGGCGCTCG GTGAAGCGCG GTGTCACGAC GGCGAGCTGG
GCCGGCGCGG CGTGGGCGGC CGCCGTCGTG GCGCGCGCGA TCCACCGACG GCTCTTCGGC
CGCCGCCCCT GA
 
Protein sequence
MPAADRPAVA FFDVDNTVIR GASAYHLARE LYRRRFFTAW DILWFGAHAF AYFLFGENNV 
RIQKVRRRAL DIIAGRTEAE MISIGEDVYD QVLGSRVFPG ARALIGAHLA AGHEVWLVTA
TPREIGDLIA RRLGATGAVG TVAESRDGIY TGRLVGDMMH GEHKADAVRE IASRAGVELE
DCSAYGDSIN DVPMLSIVGH PCAINPDPRL RLHCAGTGWP VRDFRRRRRS VKRGVTTASW
AGAAWAAAVV ARAIHRRLFG RRP