| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0237 |
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| Symbol | |
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| ID | 4203130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 286074 |
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| End bp | 286709 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 24% |
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| IMG OID | 638081121 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_694699 |
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| Protein GI | 110801209 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000336173 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACTA CTAAAATAGC TTTATTTGAT GTAGATAAAA CATTGATACA TGGTGATTCC
ATGTTTTATT TACTTAAATA CACAATAAAG AAAAAACCTT ATTTATCCTT TCATTTACCT
ATATTATTTA TAAAATTATT AGGATATAAG GCTAAAATAA TAACTACTAC CAAAGCAAAA
GAATCTATGT TTTATACCTT AAATTATCTC TGTGAAGGTG ATTTAAGTGA CTTTTTTAAT
ACAATGATAA AACCTAAGAT TTATAAAGAT GCTTTGACTA AAATTAAAGA TTTAAAAAGT
AAAGGATATT ATATATTATT GATTTCAGCA TCTCCAGAAT GTTACTTAAA ATATTTTGAG
GATGAAGATT TTATAGATGG TGTAATAGGA ACTAAATTCG AATTTATAAA TGGCAGATTT
ATAAACAAAA TAAGTGGACT AAATTGTAAG GGTGAAGAAA AGGTCTCAAG AATAAATACA
TTTTTACAAG AACATGATTT GATAATTGAT AAAGAAAATT CCGTTGCTTA TTCTGACTCT
TTATCAGATG CGCCAATGTT TAGTTTAGTT AAGAATGCAT ATCTTATTAA TAGCAAAAGT
TCAAATCATG AATATGAAAT ATTAAAATGG AAGTAG
|
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| Protein sequence | MNTTKIALFD VDKTLIHGDS MFYLLKYTIK KKPYLSFHLP ILFIKLLGYK AKIITTTKAK
ESMFYTLNYL CEGDLSDFFN TMIKPKIYKD ALTKIKDLKS KGYYILLISA SPECYLKYFE
DEDFIDGVIG TKFEFINGRF INKISGLNCK GEEKVSRINT FLQEHDLIID KENSVAYSDS
LSDAPMFSLV KNAYLINSKS SNHEYEILKW K
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