More than 300 homologs were found in PanDaTox collection
for query gene RSP_1275 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007493  RSP_1275  Crp/Fnr family transcriptional regulator  100 
 
 		 249 aa  502  1e-141  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_2934  cyclic nucleotide-binding protein  97.99 
 
 		 249 aa  491  9.999999999999999e-139  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_2705  cyclic nucleotide-binding protein  88.57 
 
 		 249 aa  435  1e-121  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_3568  cyclic nucleotide-binding domain-containing protein  56.85 
 
 		 242 aa  289  3e-77  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009956  Dshi_3844  cyclic nucleotide-binding protein  58.16 
 
 		 242 aa  287  1e-76  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_2400  CRP/FNR family transcriptional regulator  48.33 
 
 		 250 aa  221  9.999999999999999e-57  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.0375093 
 
 
-
 
NC_011369  Rleg2_1000  transcriptional regulator, Crp/Fnr family  48.33 
 
 		 250 aa  210  2e-53  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.523077  normal  0.289991 
 
 
-
 
NC_012850  Rleg_1153  transcriptional regulator, Crp/Fnr family  47.08 
 
 		 250 aa  206  4e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A2201  transcriptional regulator  46.86 
 
 		 262 aa  202  4e-51  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.586423 
 
 
-
 
NC_007643  Rru_A1787  cyclic nucleotide-binding domain-containing protein  46.4 
 
 		 263 aa  202  5e-51  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_011988  Avi_5989  transcriptional regulator CRP family  44.17 
 
 		 257 aa  193  2e-48  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0532  cyclic nucleotide-binding protein  43.93 
 
 		 276 aa  191  7e-48  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.053126  normal  0.207643 
 
 
-
 
NC_008752  Aave_4040  Crp/FNR family transcriptional regulator  44.65 
 
 		 256 aa  182  5.0000000000000004e-45  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.858211 
 
 
-
 
NC_012791  Vapar_0997  transcriptional regulator, Crp/Fnr family  44.3 
 
 		 230 aa  182  6e-45  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_1734  Crp/FNR family transcriptional regulator  40 
 
 		 241 aa  181  1e-44  Methylobacillus flagellatus KT  Bacteria  normal  0.79675  hitchhiker  0.000773544 
 
 
-
 
NC_007794  Saro_0490  CRP/FNR family transcriptional regulator  45.67 
 
 		 256 aa  162  4.0000000000000004e-39  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_0783  cyclic nucleotide-binding  32.89 
 
 		 376 aa  120  1.9999999999999998e-26  Methylobacterium extorquens PA1  Bacteria  normal  0.0359827  normal  1 
 
 
-
 
NC_010172  Mext_0073  cyclic nucleotide-binding  33.33 
 
 		 255 aa  119  3e-26  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_3385  transcriptional regulator, Crp/Fnr family  33.33 
 
 		 384 aa  118  9e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_0060  transcriptional regulator, Crp/Fnr family  33.49 
 
 		 384 aa  118  9.999999999999999e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_6209  Crp/FNR family transcriptional regulator  34.07 
 
 		 247 aa  112  4.0000000000000004e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.0102902  normal  0.673418 
 
 
-
 
NC_009429  Rsph17025_3486  putative signal transduction histidine kinase  34.05 
 
 		 243 aa  111  9e-24  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.173486 
 
 
-
 
NC_011894  Mnod_7477  transcriptional regulator, Crp/Fnr family  33.7 
 
 		 246 aa  111  1.0000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.403111  n/a   
 
 
-
 
NC_007494  RSP_3616  Crp/FNR family transcriptional regulator  34.93 
 
 		 243 aa  111  1.0000000000000001e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_0604  cyclic nucleotide-binding protein  32.88 
 
 		 246 aa  110  3e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_1953  Crp/FNR family transcriptional regulator  32.88 
 
 		 246 aa  109  4.0000000000000004e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_7493  transcriptional regulator, Crp/Fnr family  31.46 
 
 		 246 aa  109  4.0000000000000004e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_2763  cyclic nucleotide-binding  33.63 
 
 		 244 aa  106  4e-22  Methylobacterium extorquens PA1  Bacteria  normal  0.746131  normal  1 
 
 
-
 
NC_011757  Mchl_2990  transcriptional regulator, Crp/Fnr family  33.63 
 
 		 244 aa  106  4e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_3758  transcriptional regulator, Crp/Fnr family  34.46 
 
 		 247 aa  105  5e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_4270  CRP/FNR family transcriptional regulator  33.5 
 
 		 225 aa  103  2e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.0893417 
 
 
-
 
NC_010505  Mrad2831_4786  cyclic nucleotide-binding protein  32.66 
 
 		 243 aa  103  3e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_2886  transcriptional regulator, Crp/Fnr family  33.19 
 
 		 244 aa  101  9e-21  Methylobacterium populi BJ001  Bacteria  normal  0.473656  normal  1 
 
 
-
 
NC_010511  M446_4564  Crp/FNR family transcriptional regulator  32.4 
 
 		 257 aa  99  7e-20  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00106309 
 
 
-
 
NC_010725  Mpop_5417  transcriptional regulator, Crp/Fnr family  35.79 
 
 		 298 aa  98.6  9e-20  Methylobacterium populi BJ001  Bacteria  normal  0.36754  normal  1 
 
 
-
 
NC_011757  Mchl_5361  transcriptional regulator, Crp/Fnr family  33.33 
 
 		 299 aa  97.1  2e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_2024  cyclic nucleotide-binding  28.81 
 
 		 259 aa  96.7  3e-19  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.996332 
 
 
-
 
NC_011757  Mchl_2301  transcriptional regulator, Crp/Fnr family  28.81 
 
 		 259 aa  96.7  3e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.161686 
 
 
-
 
NC_010511  M446_6403  Crp/FNR family transcriptional regulator  32.02 
 
 		 246 aa  96.3  4e-19  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_1230  Crp/FNR family transcriptional regulator  31.31 
 
 		 263 aa  96.3  4e-19  Methylobacterium sp. 4-46  Bacteria  normal  0.583862  normal  1 
 
 
-
 
NC_010725  Mpop_0133  transcriptional regulator, Crp/Fnr family  30.15 
 
 		 268 aa  95.9  5e-19  Methylobacterium populi BJ001  Bacteria  normal  0.564261  normal  0.0379159 
 
 
-
 
NC_010172  Mext_4876  cyclic nucleotide-binding  33.33 
 
 		 317 aa  95.9  5e-19  Methylobacterium extorquens PA1  Bacteria  normal  0.155933  normal  1 
 
 
-
 
NC_008254  Meso_3865  Crp/FNR family transcriptional regulator  28.9 
 
 		 252 aa  94.7  1e-18  Chelativorans sp. BNC1  Bacteria  normal  0.925805  n/a   
 
 
-
 
NC_010725  Mpop_3862  transcriptional regulator, Crp/Fnr family  30.22 
 
 		 249 aa  94.4  2e-18  Methylobacterium populi BJ001  Bacteria  normal  0.582037  normal  0.123136 
 
 
-
 
NC_010511  M446_1835  cyclic nucleotide-binding protein  29.46 
 
 		 281 aa  93.6  2e-18  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_4497  transcriptional regulator, Crp/Fnr family  33.13 
 
 		 255 aa  93.6  3e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0140276  n/a   
 
 
-
 
NC_010725  Mpop_1986  transcriptional regulator, Crp/Fnr family  28.39 
 
 		 259 aa  92.4  5e-18  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009505  BOV_0189  Crp/FNR family transcriptional regulator  28.77 
 
 		 235 aa  92.4  6e-18  Brucella ovis ATCC 25840  Bacteria  normal  0.338052  n/a   
 
 
-
 
NC_010505  Mrad2831_2433  Crp/FNR family transcriptional regulator  28.39 
 
 		 247 aa  92  9e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.168738  normal  0.817452 
 
 
-
 
NC_004310  BR0196  Crp/FNR family transcriptional regulator  28.64 
 
 		 253 aa  91.3  1e-17  Brucella suis 1330  Bacteria  normal  0.0367027  n/a   
 
 
-
 
NC_010511  M446_0946  Crp/FNR family transcriptional regulator  29.57 
 
 		 253 aa  90.9  2e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.336903  normal  1 
 
 
-
 
NC_010505  Mrad2831_1439  Crp/FNR family transcriptional regulator  28.5 
 
 		 243 aa  90.5  2e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  hitchhiker  0.000118444 
 
 
-
 
NC_011894  Mnod_3167  transcriptional regulator, Crp/Fnr family  29.95 
 
 		 307 aa  90.1  3e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010510  Mrad2831_6249  Crp/FNR family transcriptional regulator  32.56 
 
 		 281 aa  88.6  9e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.999867 
 
 
-
 
NC_007802  Jann_2207  cyclic nucleotide-binding domain-containing protein  27.32 
 
 		 260 aa  87.8  1e-16  Jannaschia sp. CCS1  Bacteria  normal  0.363509  normal  1 
 
 
-
 
NC_011757  Mchl_3788  transcriptional regulator, Crp/Fnr family  30.15 
 
 		 249 aa  87.8  1e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.371562 
 
 
-
 
NC_010505  Mrad2831_1359  Crp/FNR family transcriptional regulator  35.71 
 
 		 236 aa  88.2  1e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.342582  normal  0.0135439 
 
 
-
 
NC_010172  Mext_3480  cyclic nucleotide-binding  30.15 
 
 		 249 aa  87.8  2e-16  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_3389  transcriptional regulator, Crp/Fnr family  26.25 
 
 		 248 aa  87  2e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_1991  transcriptional regulator, Crp/Fnr family  31.12 
 
 		 249 aa  87.8  2e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.250977  n/a   
 
 
-
 
NC_013889  TK90_1862  transcriptional regulator, Crp/Fnr family  30.66 
 
 		 250 aa  86.7  3e-16  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0720375  normal  0.182435 
 
 
-
 
NC_010172  Mext_0772  cyclic nucleotide-binding  32.14 
 
 		 254 aa  87  3e-16  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_2367  putative transcriptional regulator, Crp/Fnr family  34.97 
 
 		 255 aa  86.3  5e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0615204  n/a   
 
 
-
 
NC_009668  Oant_3367  CRP/FNR family transcriptional regulator  27.35 
 
 		 252 aa  85.9  5e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.184948  n/a   
 
 
-
 
NC_008048  Sala_1678  Crp/FNR family transcriptional regulator  29.05 
 
 		 230 aa  85.9  6e-16  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.330352  normal  1 
 
 
-
 
NC_008254  Meso_1485  cyclic nucleotide-binding protein  30.73 
 
 		 244 aa  85.9  6e-16  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_3832  transcriptional regulator, Crp/Fnr family  30.23 
 
 		 245 aa  85.5  7e-16  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_2944  transcriptional regulator, Crp/Fnr family  28.84 
 
 		 246 aa  84.7  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0738845  normal  1 
 
 
-
 
NC_007493  RSP_0698  Crp-Fnr regulatory protein (FnrL)  26.92 
 
 		 248 aa  84  0.000000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_2353  CRP/FNR family transcriptional regulator  26.92 
 
 		 248 aa  84  0.000000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.689366  normal  0.139893 
 
 
-
 
NC_010505  Mrad2831_2447  cyclic nucleotide-binding protein  33.33 
 
 		 255 aa  84  0.000000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_2634  CRP/FNR family transcriptional regulator  29.83 
 
 		 249 aa  83.2  0.000000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_0532  CRP/FNR family transcriptional regulator  27.23 
 
 		 248 aa  83.6  0.000000000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.283437 
 
 
-
 
NC_009667  Oant_0266  CRP/FNR family transcriptional regulator  28.7 
 
 		 253 aa  83.6  0.000000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_1945  Crp/FNR family transcriptional regulator  29.61 
 
 		 242 aa  83.2  0.000000000000004  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_0983  Crp/FNR family transcriptional regulator  27.31 
 
 		 245 aa  82  0.000000000000008  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_1441  Crp/FNR family transcriptional regulator  27.64 
 
 		 259 aa  81.6  0.00000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  hitchhiker  0.00010652 
 
 
-
 
NC_008254  Meso_2575  Crp/FNR family transcriptional regulator  33.85 
 
 		 240 aa  80.5  0.00000000000002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0422  transcriptional regulator, Crp/Fnr family  30.57 
 
 		 246 aa  80.9  0.00000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR0654  Crp/FNR family transcriptional regulator  28.63 
 
 		 248 aa  80.1  0.00000000000003  Brucella suis 1330  Bacteria  normal  0.48838  n/a   
 
 
-
 
NC_007794  Saro_2581  Crp/FNR family transcriptional regulator  27.49 
 
 		 231 aa  80.1  0.00000000000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.658135  n/a   
 
 
-
 
NC_011369  Rleg2_2686  transcriptional regulator, Crp/Fnr family  27.44 
 
 		 239 aa  80.1  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.038663  normal  1 
 
 
-
 
NC_010505  Mrad2831_2950  Crp/FNR family transcriptional regulator  26.6 
 
 		 250 aa  79.3  0.00000000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal  1 
 
 
-
 
NC_010511  M446_4036  Crp/FNR family transcriptional regulator  31.98 
 
 		 315 aa  79  0.00000000000007  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_0953  CRP/FNR family transcriptional regulator  30.05 
 
 		 254 aa  79  0.00000000000008  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_6132  Crp/FNR family transcriptional regulator  29.69 
 
 		 245 aa  78.6  0.00000000000008  Methylobacterium sp. 4-46  Bacteria  normal  0.0884478  normal  1 
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  29.5 
 
 		 238 aa  78.6  0.0000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_1631  CRP/FNR family transcriptional regulator  28.92 
 
 		 310 aa  77.8  0.0000000000001  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_1752  transcriptional regulator, Crp/Fnr family  27.62 
 
 		 250 aa  77.8  0.0000000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.103124 
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  29.5 
 
 		 238 aa  78.6  0.0000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_004311  BRA0414  Crp/FNR family transcriptional regulator  24.79 
 
 		 252 aa  77  0.0000000000002  Brucella suis 1330  Bacteria  normal  0.766284  n/a   
 
 
-
 
NC_011365  Gdia_1984  transcriptional regulator, Crp/Fnr family  29.96 
 
 		 250 aa  77.8  0.0000000000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.312779  normal  1 
 
 
-
 
NC_009504  BOV_A0357  Crp/FNR family transcriptional regulator  24.79 
 
 		 252 aa  77  0.0000000000002  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_0576  CRP/FNR family transcriptional regulator  29.86 
 
 		 235 aa  77.8  0.0000000000002  Acidiphilium cryptum JF-5  Bacteria  normal  0.670039  n/a   
 
 
-
 
NC_008740  Maqu_1854  CRP/FNR family transcriptional regulator  26.11 
 
 		 250 aa  77.4  0.0000000000002  Marinobacter aquaeolei VT8  Bacteria  normal  0.191124  n/a   
 
 
-
 
NC_009505  BOV_0647  nitrogen fixation regulation protein fixk  28.22 
 
 		 251 aa  76.6  0.0000000000003  Brucella ovis ATCC 25840  Bacteria  normal  0.774151  n/a   
 
 
-
 
NC_009485  BBta_0859  CRP/FNR family transcriptional regulator  29.9 
 
 		 234 aa  76.6  0.0000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.0477074 
 
 
-
 
NC_007643  Rru_A3322  Crp/FNR family transcriptional regulator  28.14 
 
 		 262 aa  75.9  0.0000000000005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0702622  n/a   
 
 
-
 
NC_011004  Rpal_4713  transcriptional regulator, Crp/Fnr family  27.32 
 
 		 239 aa  75.9  0.0000000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.557049  n/a   
 
 
-
 
NC_008686  Pden_2108  CRP/FNR family transcriptional regulator  27.8 
 
 		 243 aa  75.5  0.0000000000007  Paracoccus denitrificans PD1222  Bacteria  normal  0.819689  normal  0.0771917 
 
 
-
 
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