| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0997 |
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| Symbol | |
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| ID | 7971968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1095071 |
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| End bp | 1095763 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791593 |
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| Product | transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002942914 |
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| Protein GI | 239814004 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCCT TCCTGCCGGT GGCGCCGCAA CAGCTCGAAG CCATCGCATC CTTCAGGGCC
GGCTCCCGCC GCGTCGCCGC CGGCGCCACC ATCATCGACG AGCACCGGCC GAGCGCCGAG
CTGTTCACGC TCTATGCCGG ATGGGCCTTT CGCTACAAGA CGCTGAGCGA CGGCCGGCGC
CAGATACTGA GCTTTCTGCT GCCCGGCGAC TTCATCGGCC TGCAGGACGA GTTTGCCGAC
GGCCACACGC ACGGCGTGGA GGCCGCGAGC GAGGCCACGC TCTGCGTGTT TCCGCGCGGC
CGGCTCTGGG AGCTGTTCCA TGCCCAGCCG AAGCTCGGTT ACGACATCAC CTGGCTGGCC
GCGCGCGAGG AAAAGCTGGT CGACGACAAC CTGGTCACCA CGGGCCGCCG CAACGCGGCC
GAGCGCGTGG CCATGCTGCT GATGCACCTG TACCGCCGGG CCCAGCGCGT GGGCATGGTG
CGCGACGGCT GGGTCGAGTT TCCGTTCAGC CAGCAGCACC TGGCCGATGC ACTGGGGCTG
TCGCTGGTGC ATACCAACAA GACGCTGCGC CGGCTGCAGA GCCTGGGGCT CTACAAGCTC
GACGCCGGCT GGCTGCGCAT CCTGGAGCCT CGCGCGCTCG AGGCGCTGGG AGACTACTTC
GAGCGCCCGA TGCGGCCGAC GCCGCTGATC TAG
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| Protein sequence | MEAFLPVAPQ QLEAIASFRA GSRRVAAGAT IIDEHRPSAE LFTLYAGWAF RYKTLSDGRR
QILSFLLPGD FIGLQDEFAD GHTHGVEAAS EATLCVFPRG RLWELFHAQP KLGYDITWLA
AREEKLVDDN LVTTGRRNAA ERVAMLLMHL YRRAQRVGMV RDGWVEFPFS QQHLADALGL
SLVHTNKTLR RLQSLGLYKL DAGWLRILEP RALEALGDYF ERPMRPTPLI
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