| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0133 |
|---|
| Symbol | |
|---|
| ID | 6311052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 133779 |
|---|
| End bp | 134585 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642648843 |
|---|
| Product | transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_001922860 |
|---|
| Protein GI | 188579415 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.564261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0379159 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGACC ACAATCCGCT GCTGAGGAAG CTCGCCGCCC TGTCGCCGTT ATCGGACGAG
GACCGACGCC ACTTGGCGCA GGTCGCCGCC CACCCCGTCG CGGTCCCCGC CAGGACGGAC
TTGATCCGCG AGGGTGACAC GCCGCGGGGC GTGTTCCTCG TCCTCGAAGG CATGGCTTGC
CGCTACAAGA TCCTGCCGGA CGGAACCCGG CAGGTGCTCG CCTTCCTCAT CCCTGGCGAC
TTGTGCGACT TAGACGTCTC CTTGCTCAAC GCGATGGACC ACGCCATCGG CACGCTGTCC
CCCTGTTGCG TGGCGCACAT CCCGACCCGG ACGGTGGGGG ACCTGCTCGA CGGCCATCCC
GGCATCGCCC GGGCCATGCG CCTCGCTGCC CTGGTCGAGG CCGCGACGGC GCGGCAGTGG
CTCGTGAACG TCGGCCGGCG CTCCTGCGAG CGGCGCCTCG CCCACATCCT GTGCGAGATG
CTGGTGCGGC TCCGGTCCGT GGGGCTGGCC TCCGACGTGG GGTACGACCT CCTACTCACG
CAGGTCGACC TCGCCGACGC GACCGGGATG ACGTCCGTCC ACGTCAACCG GTCCCTGCAG
TCGCTGCGGA AACGGGGGCT GATCGAGATC CGGGGCCGCC GCGTCGTCAT CCCGGACTTG
GCAGCCCTGG AGGCGGCGGC TGATTTCGAC TCGGGATACC TGCACCGCGC TACGCCCGAC
CCCCGACCGG ACCCCGGGCT GCGCGGAACT GCCCTCCCGG ACGCCGCCGC CCTCCGGGAT
GCAGTCCCGC CCGAGGCAAG GGCCTAG
|
|---|
| Protein sequence | MPDHNPLLRK LAALSPLSDE DRRHLAQVAA HPVAVPARTD LIREGDTPRG VFLVLEGMAC
RYKILPDGTR QVLAFLIPGD LCDLDVSLLN AMDHAIGTLS PCCVAHIPTR TVGDLLDGHP
GIARAMRLAA LVEAATARQW LVNVGRRSCE RRLAHILCEM LVRLRSVGLA SDVGYDLLLT
QVDLADATGM TSVHVNRSLQ SLRKRGLIEI RGRRVVIPDL AALEAAADFD SGYLHRATPD
PRPDPGLRGT ALPDAAALRD AVPPEARA
|
|---|
| |