More than 300 homologs were found in PanDaTox collection
for query gene Rsph17029_2934 on replicon NC_009049
Organism: Rhodobacter sphaeroides ATCC 17029



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009049  Rsph17029_2934  cyclic nucleotide-binding protein  100 
 
 
249 aa  503  1e-141  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1275  Crp/Fnr family transcriptional regulator  97.99 
 
 
249 aa  491  9.999999999999999e-139  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2705  cyclic nucleotide-binding protein  88.43 
 
 
249 aa  434  1e-121  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3568  cyclic nucleotide-binding domain-containing protein  56.85 
 
 
242 aa  289  3e-77  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009956  Dshi_3844  cyclic nucleotide-binding protein  58.16 
 
 
242 aa  287  1e-76  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2400  CRP/FNR family transcriptional regulator  48.33 
 
 
250 aa  221  7e-57  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0375093 
 
 
-
 
NC_011369  Rleg2_1000  transcriptional regulator, Crp/Fnr family  48.33 
 
 
250 aa  211  9e-54  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.523077  normal  0.289991 
 
 
-
 
NC_012850  Rleg_1153  transcriptional regulator, Crp/Fnr family  47.08 
 
 
250 aa  206  3e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2201  transcriptional regulator  47.28 
 
 
262 aa  204  2e-51  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.586423 
 
 
-
 
NC_007643  Rru_A1787  cyclic nucleotide-binding domain-containing protein  46.98 
 
 
263 aa  200  1.9999999999999998e-50  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5989  transcriptional regulator CRP family  44.17 
 
 
257 aa  193  2e-48  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0532  cyclic nucleotide-binding protein  43.51 
 
 
276 aa  190  2e-47  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.053126  normal  0.207643 
 
 
-
 
NC_007947  Mfla_1734  Crp/FNR family transcriptional regulator  40.43 
 
 
241 aa  182  4.0000000000000006e-45  Methylobacillus flagellatus KT  Bacteria  normal  0.79675  hitchhiker  0.000773544 
 
 
-
 
NC_012791  Vapar_0997  transcriptional regulator, Crp/Fnr family  44.3 
 
 
230 aa  182  4.0000000000000006e-45  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4040  Crp/FNR family transcriptional regulator  44.39 
 
 
256 aa  180  2e-44  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.858211 
 
 
-
 
NC_007794  Saro_0490  CRP/FNR family transcriptional regulator  46.15 
 
 
256 aa  163  2.0000000000000002e-39  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0783  cyclic nucleotide-binding  32.89 
 
 
376 aa  119  6e-26  Methylobacterium extorquens PA1  Bacteria  normal  0.0359827  normal 
 
 
-
 
NC_010172  Mext_0073  cyclic nucleotide-binding  32.76 
 
 
255 aa  117  1.9999999999999998e-25  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0060  transcriptional regulator, Crp/Fnr family  33.03 
 
 
384 aa  116  3.9999999999999997e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3385  transcriptional regulator, Crp/Fnr family  32.89 
 
 
384 aa  116  3.9999999999999997e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6209  Crp/FNR family transcriptional regulator  34.07 
 
 
247 aa  113  3e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.0102902  normal  0.673418 
 
 
-
 
NC_007494  RSP_3616  Crp/FNR family transcriptional regulator  34.93 
 
 
243 aa  112  7.000000000000001e-24  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7477  transcriptional regulator, Crp/Fnr family  33.7 
 
 
246 aa  111  1.0000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.403111  n/a   
 
 
-
 
NC_009049  Rsph17029_0604  cyclic nucleotide-binding protein  33.33 
 
 
246 aa  111  1.0000000000000001e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3486  putative signal transduction histidine kinase  34.2 
 
 
243 aa  110  2.0000000000000002e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.173486 
 
 
-
 
NC_007493  RSP_1953  Crp/FNR family transcriptional regulator  33.33 
 
 
246 aa  110  2.0000000000000002e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7493  transcriptional regulator, Crp/Fnr family  31.46 
 
 
246 aa  110  3e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2990  transcriptional regulator, Crp/Fnr family  34.07 
 
 
244 aa  107  1e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2763  cyclic nucleotide-binding  34.07 
 
 
244 aa  107  1e-22  Methylobacterium extorquens PA1  Bacteria  normal  0.746131  normal 
 
 
-
 
NC_011894  Mnod_3758  transcriptional regulator, Crp/Fnr family  34.46 
 
 
247 aa  106  3e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4270  CRP/FNR family transcriptional regulator  33.5 
 
 
225 aa  104  1e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0893417 
 
 
-
 
NC_010725  Mpop_2886  transcriptional regulator, Crp/Fnr family  31.78 
 
 
244 aa  103  3e-21  Methylobacterium populi BJ001  Bacteria  normal  0.473656  normal 
 
 
-
 
NC_010505  Mrad2831_4786  cyclic nucleotide-binding protein  32.16 
 
 
243 aa  102  5e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4564  Crp/FNR family transcriptional regulator  32.96 
 
 
257 aa  100  2e-20  Methylobacterium sp. 4-46  Bacteria  normal  decreased coverage  0.00106309 
 
 
-
 
NC_010725  Mpop_5417  transcriptional regulator, Crp/Fnr family  35.26 
 
 
298 aa  97.4  2e-19  Methylobacterium populi BJ001  Bacteria  normal  0.36754  normal 
 
 
-
 
NC_010511  M446_6403  Crp/FNR family transcriptional regulator  32.02 
 
 
246 aa  96.7  3e-19  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_5361  transcriptional regulator, Crp/Fnr family  32.84 
 
 
299 aa  95.9  6e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2024  cyclic nucleotide-binding  28.39 
 
 
259 aa  94.7  1e-18  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.996332 
 
 
-
 
NC_010172  Mext_4876  cyclic nucleotide-binding  32.84 
 
 
317 aa  95.1  1e-18  Methylobacterium extorquens PA1  Bacteria  normal  0.155933  normal 
 
 
-
 
NC_010511  M446_1230  Crp/FNR family transcriptional regulator  30.92 
 
 
263 aa  94.7  1e-18  Methylobacterium sp. 4-46  Bacteria  normal  0.583862  normal 
 
 
-
 
NC_011757  Mchl_2301  transcriptional regulator, Crp/Fnr family  28.39 
 
 
259 aa  94.7  1e-18  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.161686 
 
 
-
 
NC_010725  Mpop_0133  transcriptional regulator, Crp/Fnr family  29.65 
 
 
268 aa  94.7  1e-18  Methylobacterium populi BJ001  Bacteria  normal  0.564261  normal  0.0379159 
 
 
-
 
NC_008254  Meso_3865  Crp/FNR family transcriptional regulator  28.44 
 
 
252 aa  93.6  2e-18  Chelativorans sp. BNC1  Bacteria  normal  0.925805  n/a   
 
 
-
 
NC_011894  Mnod_4497  transcriptional regulator, Crp/Fnr family  31.84 
 
 
255 aa  94.4  2e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0140276  n/a   
 
 
-
 
NC_010725  Mpop_3862  transcriptional regulator, Crp/Fnr family  29.78 
 
 
249 aa  93.2  4e-18  Methylobacterium populi BJ001  Bacteria  normal  0.582037  normal  0.123136 
 
 
-
 
NC_009505  BOV_0189  Crp/FNR family transcriptional regulator  28.77 
 
 
235 aa  92.8  5e-18  Brucella ovis ATCC 25840  Bacteria  normal  0.338052  n/a   
 
 
-
 
NC_010511  M446_1835  cyclic nucleotide-binding protein  29.02 
 
 
281 aa  92.4  6e-18  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR0196  Crp/FNR family transcriptional regulator  28.64 
 
 
253 aa  92  8e-18  Brucella suis 1330  Bacteria  normal  0.0367027  n/a   
 
 
-
 
NC_010505  Mrad2831_2433  Crp/FNR family transcriptional regulator  29.02 
 
 
247 aa  92  9e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.168738  normal  0.817452 
 
 
-
 
NC_010505  Mrad2831_1439  Crp/FNR family transcriptional regulator  31.79 
 
 
243 aa  90.5  2e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.000118444 
 
 
-
 
NC_010725  Mpop_1986  transcriptional regulator, Crp/Fnr family  27.97 
 
 
259 aa  90.5  2e-17  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2207  cyclic nucleotide-binding domain-containing protein  28.02 
 
 
260 aa  90.5  2e-17  Jannaschia sp. CCS1  Bacteria  normal  0.363509  normal 
 
 
-
 
NC_010511  M446_0946  Crp/FNR family transcriptional regulator  29.57 
 
 
253 aa  89.7  4e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.336903  normal 
 
 
-
 
NC_010510  Mrad2831_6249  Crp/FNR family transcriptional regulator  34.52 
 
 
281 aa  88.2  1e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.999867 
 
 
-
 
NC_011894  Mnod_1991  transcriptional regulator, Crp/Fnr family  31.12 
 
 
249 aa  87.8  1e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.250977  n/a   
 
 
-
 
NC_010505  Mrad2831_1359  Crp/FNR family transcriptional regulator  35.71 
 
 
236 aa  88.2  1e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.342582  normal  0.0135439 
 
 
-
 
NC_007493  RSP_0698  Crp-Fnr regulatory protein (FnrL)  26.83 
 
 
248 aa  87  2e-16  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3389  transcriptional regulator, Crp/Fnr family  26.34 
 
 
248 aa  87.4  2e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3167  transcriptional regulator, Crp/Fnr family  32.56 
 
 
307 aa  87.4  2e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3367  CRP/FNR family transcriptional regulator  27.8 
 
 
252 aa  87.4  2e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.184948  n/a   
 
 
-
 
NC_009049  Rsph17029_2353  CRP/FNR family transcriptional regulator  26.83 
 
 
248 aa  87  2e-16  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.689366  normal  0.139893 
 
 
-
 
NC_009428  Rsph17025_0532  CRP/FNR family transcriptional regulator  27.11 
 
 
248 aa  86.3  4e-16  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.283437 
 
 
-
 
NC_010172  Mext_3480  cyclic nucleotide-binding  29.65 
 
 
249 aa  86.3  4e-16  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2367  putative transcriptional regulator, Crp/Fnr family  34.97 
 
 
255 aa  86.3  4e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0615204  n/a   
 
 
-
 
NC_008048  Sala_1678  Crp/FNR family transcriptional regulator  29.05 
 
 
230 aa  86.7  4e-16  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.330352  normal 
 
 
-
 
NC_011757  Mchl_3788  transcriptional regulator, Crp/Fnr family  29.65 
 
 
249 aa  86.7  4e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.371562 
 
 
-
 
NC_010172  Mext_0772  cyclic nucleotide-binding  31.63 
 
 
254 aa  85.9  6e-16  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1485  cyclic nucleotide-binding protein  31.67 
 
 
244 aa  85.5  7e-16  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1862  transcriptional regulator, Crp/Fnr family  30.19 
 
 
250 aa  85.5  8e-16  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0720375  normal  0.182435 
 
 
-
 
NC_010725  Mpop_3832  transcriptional regulator, Crp/Fnr family  29.77 
 
 
245 aa  84.7  0.000000000000001  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2447  cyclic nucleotide-binding protein  32.02 
 
 
255 aa  84  0.000000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0266  CRP/FNR family transcriptional regulator  28.7 
 
 
253 aa  84  0.000000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2944  transcriptional regulator, Crp/Fnr family  28.37 
 
 
246 aa  83.6  0.000000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0738845  normal 
 
 
-
 
NC_009667  Oant_2634  CRP/FNR family transcriptional regulator  29.41 
 
 
249 aa  82  0.000000000000007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1945  Crp/FNR family transcriptional regulator  29.27 
 
 
242 aa  81.3  0.00000000000001  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0983  Crp/FNR family transcriptional regulator  26.29 
 
 
245 aa  81.3  0.00000000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2575  Crp/FNR family transcriptional regulator  33.85 
 
 
240 aa  80.9  0.00000000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2686  transcriptional regulator, Crp/Fnr family  27.44 
 
 
239 aa  80.5  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.038663  normal 
 
 
-
 
NC_010505  Mrad2831_1441  Crp/FNR family transcriptional regulator  27.14 
 
 
259 aa  80.1  0.00000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00010652 
 
 
-
 
NC_010505  Mrad2831_2950  Crp/FNR family transcriptional regulator  26.6 
 
 
250 aa  79.7  0.00000000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal 
 
 
-
 
NC_004310  BR0654  Crp/FNR family transcriptional regulator  28.63 
 
 
248 aa  79.3  0.00000000000005  Brucella suis 1330  Bacteria  normal  0.48838  n/a   
 
 
-
 
NC_011894  Mnod_0422  transcriptional regulator, Crp/Fnr family  31.3 
 
 
246 aa  79.3  0.00000000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0953  CRP/FNR family transcriptional regulator  30.05 
 
 
254 aa  79.3  0.00000000000005  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0414  Crp/FNR family transcriptional regulator  26.01 
 
 
252 aa  79  0.00000000000007  Brucella suis 1330  Bacteria  normal  0.766284  n/a   
 
 
-
 
NC_009504  BOV_A0357  Crp/FNR family transcriptional regulator  26.01 
 
 
252 aa  79  0.00000000000007  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2581  Crp/FNR family transcriptional regulator  26.54 
 
 
231 aa  78.2  0.0000000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.658135  n/a   
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  29.5 
 
 
238 aa  77.8  0.0000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  29.5 
 
 
238 aa  77.8  0.0000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1854  CRP/FNR family transcriptional regulator  26.55 
 
 
250 aa  78.6  0.0000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.191124  n/a   
 
 
-
 
NC_011365  Gdia_1984  transcriptional regulator, Crp/Fnr family  29.96 
 
 
250 aa  77.4  0.0000000000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.312779  normal 
 
 
-
 
NC_009484  Acry_1631  CRP/FNR family transcriptional regulator  28.92 
 
 
310 aa  77.4  0.0000000000002  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4036  Crp/FNR family transcriptional regulator  30.3 
 
 
315 aa  77.8  0.0000000000002  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0859  CRP/FNR family transcriptional regulator  29.9 
 
 
234 aa  77  0.0000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0477074 
 
 
-
 
NC_011071  Smal_1752  transcriptional regulator, Crp/Fnr family  27.27 
 
 
250 aa  76.3  0.0000000000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.103124 
 
 
-
 
NC_008044  TM1040_2547  Crp/FNR family transcriptional regulator  27.44 
 
 
246 aa  75.9  0.0000000000005  Ruegeria sp. TM1040  Bacteria  normal  0.389339  normal  0.365128 
 
 
-
 
NC_008686  Pden_2108  CRP/FNR family transcriptional regulator  27.8 
 
 
243 aa  76.3  0.0000000000005  Paracoccus denitrificans PD1222  Bacteria  normal  0.819689  normal  0.0771917 
 
 
-
 
NC_009484  Acry_0576  CRP/FNR family transcriptional regulator  29.38 
 
 
235 aa  76.3  0.0000000000005  Acidiphilium cryptum JF-5  Bacteria  normal  0.670039  n/a   
 
 
-
 
NC_009505  BOV_0647  nitrogen fixation regulation protein fixk  28.22 
 
 
251 aa  75.9  0.0000000000006  Brucella ovis ATCC 25840  Bacteria  normal  0.774151  n/a   
 
 
-
 
NC_010511  M446_6132  Crp/FNR family transcriptional regulator  28.82 
 
 
245 aa  75.5  0.0000000000007  Methylobacterium sp. 4-46  Bacteria  normal  0.0884478  normal 
 
 
-
 
NC_007643  Rru_A3322  Crp/FNR family transcriptional regulator  27.85 
 
 
262 aa  75.1  0.000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0702622  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>