187 homologs were found in PanDaTox collection
for query gene Mrad2831_4786 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_4786  cyclic nucleotide-binding protein  100 
 
 
243 aa  488  1e-137  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2301  transcriptional regulator, Crp/Fnr family  47.58 
 
 
259 aa  195  5.000000000000001e-49  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.161686 
 
 
-
 
NC_010172  Mext_2024  cyclic nucleotide-binding  47.58 
 
 
259 aa  195  5.000000000000001e-49  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.996332 
 
 
-
 
NC_010725  Mpop_1986  transcriptional regulator, Crp/Fnr family  45.99 
 
 
259 aa  188  5e-47  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0783  cyclic nucleotide-binding  42.86 
 
 
376 aa  187  2e-46  Methylobacterium extorquens PA1  Bacteria  normal  0.0359827  normal 
 
 
-
 
NC_010172  Mext_0073  cyclic nucleotide-binding  42.86 
 
 
255 aa  182  3e-45  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3385  transcriptional regulator, Crp/Fnr family  43.04 
 
 
384 aa  177  1e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2990  transcriptional regulator, Crp/Fnr family  40.34 
 
 
244 aa  176  2e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2763  cyclic nucleotide-binding  40.34 
 
 
244 aa  177  2e-43  Methylobacterium extorquens PA1  Bacteria  normal  0.746131  normal 
 
 
-
 
NC_011757  Mchl_0060  transcriptional regulator, Crp/Fnr family  42.61 
 
 
384 aa  175  7e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2886  transcriptional regulator, Crp/Fnr family  39.06 
 
 
244 aa  170  2e-41  Methylobacterium populi BJ001  Bacteria  normal  0.473656  normal 
 
 
-
 
NC_010725  Mpop_3862  transcriptional regulator, Crp/Fnr family  40.35 
 
 
249 aa  168  7e-41  Methylobacterium populi BJ001  Bacteria  normal  0.582037  normal  0.123136 
 
 
-
 
NC_010511  M446_6209  Crp/FNR family transcriptional regulator  38.53 
 
 
247 aa  167  9e-41  Methylobacterium sp. 4-46  Bacteria  normal  0.0102902  normal  0.673418 
 
 
-
 
NC_011894  Mnod_3758  transcriptional regulator, Crp/Fnr family  37.39 
 
 
247 aa  167  1e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0133  transcriptional regulator, Crp/Fnr family  41.56 
 
 
268 aa  166  2.9999999999999998e-40  Methylobacterium populi BJ001  Bacteria  normal  0.564261  normal  0.0379159 
 
 
-
 
NC_009485  BBta_4270  CRP/FNR family transcriptional regulator  40.85 
 
 
225 aa  164  1.0000000000000001e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0893417 
 
 
-
 
NC_011757  Mchl_3788  transcriptional regulator, Crp/Fnr family  41.18 
 
 
249 aa  162  3e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.371562 
 
 
-
 
NC_010505  Mrad2831_1441  Crp/FNR family transcriptional regulator  41.63 
 
 
259 aa  163  3e-39  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00010652 
 
 
-
 
NC_010172  Mext_3480  cyclic nucleotide-binding  41.18 
 
 
249 aa  162  3e-39  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7493  transcriptional regulator, Crp/Fnr family  37.12 
 
 
246 aa  162  4.0000000000000004e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7477  transcriptional regulator, Crp/Fnr family  36.84 
 
 
246 aa  160  2e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.403111  n/a   
 
 
-
 
NC_010511  M446_6403  Crp/FNR family transcriptional regulator  38.43 
 
 
246 aa  155  7e-37  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1439  Crp/FNR family transcriptional regulator  37.22 
 
 
243 aa  154  2e-36  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.000118444 
 
 
-
 
NC_011004  Rpal_2367  putative transcriptional regulator, Crp/Fnr family  37.29 
 
 
255 aa  153  2.9999999999999998e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0615204  n/a   
 
 
-
 
NC_011894  Mnod_3167  transcriptional regulator, Crp/Fnr family  36.68 
 
 
307 aa  152  4e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4036  Crp/FNR family transcriptional regulator  38.33 
 
 
315 aa  150  1e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1359  Crp/FNR family transcriptional regulator  37.29 
 
 
236 aa  149  4e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.342582  normal  0.0135439 
 
 
-
 
NC_010511  M446_4564  Crp/FNR family transcriptional regulator  37.71 
 
 
257 aa  149  5e-35  Methylobacterium sp. 4-46  Bacteria  normal  decreased coverage  0.00106309 
 
 
-
 
NC_010172  Mext_0772  cyclic nucleotide-binding  36.02 
 
 
254 aa  147  1.0000000000000001e-34  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3832  transcriptional regulator, Crp/Fnr family  36.05 
 
 
245 aa  147  2.0000000000000003e-34  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4497  transcriptional regulator, Crp/Fnr family  37.34 
 
 
255 aa  147  2.0000000000000003e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0140276  n/a   
 
 
-
 
NC_010505  Mrad2831_2433  Crp/FNR family transcriptional regulator  36.52 
 
 
247 aa  145  6e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.168738  normal  0.817452 
 
 
-
 
NC_011757  Mchl_3389  transcriptional regulator, Crp/Fnr family  34.78 
 
 
248 aa  145  8.000000000000001e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2950  Crp/FNR family transcriptional regulator  36.75 
 
 
250 aa  144  1e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal 
 
 
-
 
NC_011894  Mnod_1991  transcriptional regulator, Crp/Fnr family  37.73 
 
 
249 aa  142  6e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.250977  n/a   
 
 
-
 
NC_010511  M446_1835  cyclic nucleotide-binding protein  38.5 
 
 
281 aa  141  7e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_5417  transcriptional regulator, Crp/Fnr family  34.33 
 
 
298 aa  140  1.9999999999999998e-32  Methylobacterium populi BJ001  Bacteria  normal  0.36754  normal 
 
 
-
 
NC_011894  Mnod_6130  putative transcriptional regulator, Crp/Fnr family  34.91 
 
 
244 aa  138  7e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011893  Mnod_8765  putative transcriptional regulator, Crp/Fnr family  34.91 
 
 
244 aa  137  1e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.474033  n/a   
 
 
-
 
NC_009485  BBta_0859  CRP/FNR family transcriptional regulator  36.05 
 
 
234 aa  136  3.0000000000000003e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0477074 
 
 
-
 
NC_008254  Meso_1485  cyclic nucleotide-binding protein  34.06 
 
 
244 aa  135  7.000000000000001e-31  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4876  cyclic nucleotide-binding  34.76 
 
 
317 aa  134  9.999999999999999e-31  Methylobacterium extorquens PA1  Bacteria  normal  0.155933  normal 
 
 
-
 
NC_010510  Mrad2831_6249  Crp/FNR family transcriptional regulator  36.24 
 
 
281 aa  134  9.999999999999999e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.999867 
 
 
-
 
NC_011757  Mchl_5361  transcriptional regulator, Crp/Fnr family  34.33 
 
 
299 aa  133  1.9999999999999998e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0953  CRP/FNR family transcriptional regulator  32.76 
 
 
254 aa  134  1.9999999999999998e-30  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3616  Crp/FNR family transcriptional regulator  33.05 
 
 
243 aa  128  9.000000000000001e-29  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0604  cyclic nucleotide-binding protein  32.74 
 
 
246 aa  127  1.0000000000000001e-28  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1953  Crp/FNR family transcriptional regulator  32.3 
 
 
246 aa  126  3e-28  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2944  transcriptional regulator, Crp/Fnr family  31.36 
 
 
246 aa  125  7e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0738845  normal 
 
 
-
 
NC_009429  Rsph17025_3486  putative signal transduction histidine kinase  31.58 
 
 
243 aa  123  3e-27  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.173486 
 
 
-
 
NC_008686  Pden_2108  CRP/FNR family transcriptional regulator  32.92 
 
 
243 aa  122  4e-27  Paracoccus denitrificans PD1222  Bacteria  normal  0.819689  normal  0.0771917 
 
 
-
 
NC_011894  Mnod_1427  putative transcriptional regulator, Crp/Fnr family  32.31 
 
 
267 aa  122  4e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2686  transcriptional regulator, Crp/Fnr family  30.77 
 
 
239 aa  122  7e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.038663  normal 
 
 
-
 
NC_010505  Mrad2831_2447  cyclic nucleotide-binding protein  34.17 
 
 
255 aa  121  8e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0414  Crp/FNR family transcriptional regulator  32.11 
 
 
252 aa  120  1.9999999999999998e-26  Brucella suis 1330  Bacteria  normal  0.766284  n/a   
 
 
-
 
NC_010511  M446_1230  Crp/FNR family transcriptional regulator  34.65 
 
 
263 aa  120  1.9999999999999998e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.583862  normal 
 
 
-
 
NC_009504  BOV_A0357  Crp/FNR family transcriptional regulator  32.11 
 
 
252 aa  120  1.9999999999999998e-26  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3367  CRP/FNR family transcriptional regulator  31.17 
 
 
252 aa  117  1.9999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.184948  n/a   
 
 
-
 
NC_010172  Mext_3499  CRP/FNR family transcriptional regulator  34.43 
 
 
286 aa  115  6e-25  Methylobacterium extorquens PA1  Bacteria  normal  0.519814  normal 
 
 
-
 
NC_011894  Mnod_5597  putative transcriptional regulator, Crp/Fnr family  35.32 
 
 
246 aa  114  1.0000000000000001e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0675352  n/a   
 
 
-
 
NC_010505  Mrad2831_2609  Crp/FNR family transcriptional regulator  33.19 
 
 
293 aa  114  1.0000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.325512  normal 
 
 
-
 
NC_009485  BBta_2391  CRP/FNR family transcriptional regulator  33.48 
 
 
274 aa  114  1.0000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1734  Crp/FNR family transcriptional regulator  30.37 
 
 
241 aa  110  2.0000000000000002e-23  Methylobacillus flagellatus KT  Bacteria  normal  0.79675  hitchhiker  0.000773544 
 
 
-
 
NC_007963  Csal_0983  Crp/FNR family transcriptional regulator  29.07 
 
 
245 aa  108  7.000000000000001e-23  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0955  CRP/FNR family transcriptional regulator  30.28 
 
 
226 aa  108  7.000000000000001e-23  Sphingomonas wittichii RW1  Bacteria  normal  0.869769  normal 
 
 
-
 
NC_009505  BOV_0189  Crp/FNR family transcriptional regulator  30.96 
 
 
235 aa  107  1e-22  Brucella ovis ATCC 25840  Bacteria  normal  0.338052  n/a   
 
 
-
 
NC_004310  BR0196  Crp/FNR family transcriptional regulator  30.96 
 
 
253 aa  107  2e-22  Brucella suis 1330  Bacteria  normal  0.0367027  n/a   
 
 
-
 
NC_011004  Rpal_3741  transcriptional regulator, Crp/Fnr family  28.51 
 
 
242 aa  105  5e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2705  cyclic nucleotide-binding protein  33.67 
 
 
249 aa  105  6e-22  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2400  CRP/FNR family transcriptional regulator  29.22 
 
 
250 aa  103  2e-21  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0375093 
 
 
-
 
NC_007493  RSP_1275  Crp/Fnr family transcriptional regulator  32.66 
 
 
249 aa  103  3e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2934  cyclic nucleotide-binding protein  32.16 
 
 
249 aa  102  5e-21  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0997  transcriptional regulator, Crp/Fnr family  30.65 
 
 
230 aa  100  2e-20  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2575  Crp/FNR family transcriptional regulator  31.41 
 
 
240 aa  100  2e-20  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6056  Crp/FNR family transcriptional regulator  27.95 
 
 
241 aa  100  2e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009956  Dshi_3844  cyclic nucleotide-binding protein  31.82 
 
 
242 aa  99.8  4e-20  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1862  transcriptional regulator, Crp/Fnr family  31.36 
 
 
250 aa  98.2  9e-20  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0720375  normal  0.182435 
 
 
-
 
NC_009667  Oant_0266  CRP/FNR family transcriptional regulator  28.43 
 
 
253 aa  98.2  1e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1184  transcriptional regulator, Crp/Fnr family  27.88 
 
 
243 aa  97.1  2e-19  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4822  cyclic nucleotide-binding protein  31.09 
 
 
243 aa  96.3  4e-19  Sinorhizobium medicae WSM419  Bacteria  normal  0.379105  normal  0.123433 
 
 
-
 
NC_007643  Rru_A1787  cyclic nucleotide-binding domain-containing protein  29.58 
 
 
263 aa  95.1  9e-19  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1000  transcriptional regulator, Crp/Fnr family  27.8 
 
 
250 aa  94.4  1e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.523077  normal  0.289991 
 
 
-
 
NC_007778  RPB_4068  Crp/FNR family transcriptional regulator  27.27 
 
 
247 aa  93.2  4e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.936766  normal 
 
 
-
 
NC_012850  Rleg_1153  transcriptional regulator, Crp/Fnr family  27.35 
 
 
250 aa  92.8  5e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3568  cyclic nucleotide-binding domain-containing protein  27.7 
 
 
242 aa  92.4  6e-18  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5989  transcriptional regulator CRP family  28.65 
 
 
257 aa  90.1  3e-17  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0532  cyclic nucleotide-binding protein  25.54 
 
 
276 aa  89.4  5e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.053126  normal  0.207643 
 
 
-
 
NC_008825  Mpe_A2201  transcriptional regulator  27.5 
 
 
262 aa  87.8  1e-16  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.586423 
 
 
-
 
NC_007958  RPD_3805  cyclic nucleotide-binding  26.16 
 
 
263 aa  87.4  2e-16  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0447  transcriptional regulator  28.82 
 
 
262 aa  87.4  2e-16  Dinoroseobacter shibae DFL 12  Bacteria  decreased coverage  0.00494896  normal 
 
 
-
 
NC_008254  Meso_3865  Crp/FNR family transcriptional regulator  28.71 
 
 
252 aa  86.3  4e-16  Chelativorans sp. BNC1  Bacteria  normal  0.925805  n/a   
 
 
-
 
NC_008752  Aave_4040  Crp/FNR family transcriptional regulator  25 
 
 
256 aa  84.7  0.000000000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.858211 
 
 
-
 
NC_008740  Maqu_1854  CRP/FNR family transcriptional regulator  27.08 
 
 
250 aa  80.9  0.00000000000002  Marinobacter aquaeolei VT8  Bacteria  normal  0.191124  n/a   
 
 
-
 
NC_007794  Saro_0490  CRP/FNR family transcriptional regulator  26.52 
 
 
256 aa  74.7  0.000000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0698  Crp-Fnr regulatory protein (FnrL)  28.05 
 
 
248 aa  69.3  0.00000000005  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2353  CRP/FNR family transcriptional regulator  28.05 
 
 
248 aa  69.3  0.00000000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.689366  normal  0.139893 
 
 
-
 
NC_009952  Dshi_0660  transcriptional regulator  28.92 
 
 
249 aa  68.9  0.00000000006  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1742  CRP/FNR family transcriptional regulator  28.02 
 
 
242 aa  68.6  0.00000000008  Sinorhizobium medicae WSM419  Bacteria  normal  0.275504  normal  0.265558 
 
 
-
 
NC_008048  Sala_1678  Crp/FNR family transcriptional regulator  27.62 
 
 
230 aa  66.6  0.0000000003  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.330352  normal 
 
 
-
 
NC_007802  Jann_2207  cyclic nucleotide-binding domain-containing protein  22.42 
 
 
260 aa  65.5  0.0000000007  Jannaschia sp. CCS1  Bacteria  normal  0.363509  normal 
 
 
-
 
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