More than 300 homologs were found in PanDaTox collection
for query gene RS00809 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003296  RS00809  transcription regulator protein  100 
 
 		 210 aa  423  1e-118  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012857  Rpic12D_3674  two component transcriptional regulator, LuxR family  90.52 
 
 		 211 aa  386  1e-106  Ralstonia pickettii 12D  Bacteria  normal  0.0912957  normal  1 
 
 
-
 
NC_010678  Rpic_4751  two component transcriptional regulator, LuxR family  90.52 
 
 		 211 aa  386  1e-106  Ralstonia pickettii 12J  Bacteria  normal  1  normal  0.558956 
 
 
-
 
NC_007614  Nmul_A1336  two component LuxR family transcriptional regulator  43.81 
 
 		 208 aa  184  1.0000000000000001e-45  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_010508  Bcenmc03_3074  two component LuxR family transcriptional regulator  42.03 
 
 		 218 aa  167  8e-41  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008060  Bcen_2441  two component LuxR family transcriptional regulator  42.03 
 
 		 218 aa  167  8e-41  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_3055  two component LuxR family transcriptional regulator  42.03 
 
 		 218 aa  167  8e-41  Burkholderia cenocepacia HI2424  Bacteria  normal  0.327843  n/a   
 
 
-
 
NC_007510  Bcep18194_A6403  two component LuxR family transcriptional regulator  42.03 
 
 		 271 aa  166  2.9999999999999998e-40  Burkholderia sp. 383  Bacteria  normal  1  normal  0.285313 
 
 
-
 
NC_007951  Bxe_A4347  two component LuxR family transcriptional regulator  43.06 
 
 		 218 aa  164  1.0000000000000001e-39  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.705126 
 
 
-
 
NC_010084  Bmul_3052  two component LuxR family transcriptional regulator  41.06 
 
 		 218 aa  163  2.0000000000000002e-39  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317078  normal  1 
 
 
-
 
NC_010551  BamMC406_2966  two component LuxR family transcriptional regulator  41.55 
 
 		 218 aa  162  4.0000000000000004e-39  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.288922 
 
 
-
 
NC_010681  Bphyt_0374  two component transcriptional regulator, LuxR family  42.58 
 
 		 218 aa  161  6e-39  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008390  Bamb_3100  two component LuxR family transcriptional regulator  41.06 
 
 		 218 aa  160  1e-38  Burkholderia ambifaria AMMD  Bacteria  normal  0.650822  n/a   
 
 
-
 
NC_007651  BTH_I0209  LuxR family DNA-binding response regulator  40.58 
 
 		 218 aa  160  2e-38  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010622  Bphy_0097  two component LuxR family transcriptional regulator  42.03 
 
 		 218 aa  159  3e-38  Burkholderia phymatum STM815  Bacteria  normal  0.605108  normal  1 
 
 
-
 
NC_009076  BURPS1106A_0243  LuxR family DNA-binding response regulator  40.67 
 
 		 218 aa  158  6e-38  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A2133  LuxR family DNA-binding response regulator  40.67 
 
 		 218 aa  158  6e-38  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_0231  LuxR family DNA-binding response regulator  40.67 
 
 		 218 aa  158  6e-38  Burkholderia pseudomallei 668  Bacteria  normal  0.214964  n/a   
 
 
-
 
NC_007434  BURPS1710b_0425  LuxR family DNA-binding response regulator  40.67 
 
 		 218 aa  158  6e-38  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0536791  n/a   
 
 
-
 
NC_009080  BMA10247_3391  LuxR family DNA-binding response regulator  40.67 
 
 		 218 aa  158  6e-38  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2955  LuxR family DNA-binding response regulator  40.67 
 
 		 218 aa  158  6e-38  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA3290  LuxR family DNA-binding response regulator  40.38 
 
 		 455 aa  156  2e-37  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_1588  two component LuxR family transcriptional regulator  40.98 
 
 		 215 aa  157  2e-37  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.731747  normal  0.987016 
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  39.81 
 
 		 215 aa  156  2e-37  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  37.44 
 
 		 210 aa  147  1.0000000000000001e-34  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  36.97 
 
 		 210 aa  145  4.0000000000000006e-34  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  36.97 
 
 		 210 aa  145  6e-34  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1595  two component LuxR family transcriptional regulator  36.06 
 
 		 209 aa  141  9e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00167261 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  35.48 
 
 		 210 aa  139  1.9999999999999998e-32  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008609  Ppro_3481  two component LuxR family transcriptional regulator  38.79 
 
 		 212 aa  139  3.9999999999999997e-32  Pelobacter propionicus DSM 2379  Bacteria  normal  0.016753  n/a   
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  36.65 
 
 		 210 aa  138  4.999999999999999e-32  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_008782  Ajs_3794  two component LuxR family transcriptional regulator  38.25 
 
 		 209 aa  138  4.999999999999999e-32  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_3068  two component transcriptional regulator, LuxR family  38.25 
 
 		 209 aa  138  4.999999999999999e-32  Acidovorax ebreus TPSY  Bacteria  normal  0.44153  n/a   
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  35.48 
 
 		 210 aa  137  8.999999999999999e-32  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_008825  Mpe_A0581  two component LuxR family transcriptional regulator  37.44 
 
 		 210 aa  137  1e-31  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010681  Bphyt_2656  two component transcriptional regulator, LuxR family  35.75 
 
 		 210 aa  135  4e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756738  normal  0.520546 
 
 
-
 
NC_007760  Adeh_1762  two component LuxR family transcriptional regulator  35.58 
 
 		 210 aa  134  8e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  38.57 
 
 		 210 aa  134  9.999999999999999e-31  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_008786  Veis_2180  two component LuxR family transcriptional regulator  37.74 
 
 		 209 aa  133  9.999999999999999e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.876214 
 
 
-
 
NC_008752  Aave_4382  two component LuxR family transcriptional regulator  35.48 
 
 		 209 aa  132  3e-30  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  35.55 
 
 		 210 aa  131  7.999999999999999e-30  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_010622  Bphy_1508  two component LuxR family transcriptional regulator  34.11 
 
 		 236 aa  131  7.999999999999999e-30  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  35.1 
 
 		 210 aa  130  2.0000000000000002e-29  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal  1 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  36.06 
 
 		 216 aa  129  2.0000000000000002e-29  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_2078  two component transcriptional regulator, LuxR family  34.62 
 
 		 210 aa  129  3e-29  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  36.02 
 
 		 210 aa  128  5.0000000000000004e-29  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_007948  Bpro_0881  two component LuxR family transcriptional regulator  35.1 
 
 		 210 aa  128  5.0000000000000004e-29  Polaromonas sp. JS666  Bacteria  normal  0.464883  normal  0.594453 
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  34.13 
 
 		 210 aa  127  9.000000000000001e-29  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0301144 
 
 
-
 
NC_007908  Rfer_0563  two component LuxR family transcriptional regulator  33.65 
 
 		 209 aa  127  1.0000000000000001e-28  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  34.13 
 
 		 239 aa  126  2.0000000000000002e-28  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal  1 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  34.13 
 
 		 210 aa  126  2.0000000000000002e-28  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  36.06 
 
 		 216 aa  127  2.0000000000000002e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_2237  two component LuxR family transcriptional regulator  34.76 
 
 		 211 aa  126  3e-28  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_0032  two component LuxR family transcriptional regulator  35.1 
 
 		 210 aa  125  3e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.245451  normal  1 
 
 
-
 
NC_007908  Rfer_1873  two component LuxR family transcriptional regulator  34.74 
 
 		 219 aa  125  5e-28  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  34.13 
 
 		 210 aa  125  6e-28  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_2172  two component transcriptional regulator, LuxR family  33.65 
 
 		 210 aa  125  6e-28  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0922  two component LuxR family transcriptional regulator  34.62 
 
 		 210 aa  124  8.000000000000001e-28  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.114328  normal  1 
 
 
-
 
NC_010002  Daci_0651  two component LuxR family transcriptional regulator  35.55 
 
 		 209 aa  124  1e-27  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.713834 
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  33.01 
 
 		 210 aa  124  1e-27  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  33.01 
 
 		 210 aa  124  1e-27  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A3494  two component LuxR family transcriptional regulator  33.63 
 
 		 226 aa  123  2e-27  Methylibium petroleiphilum PM1  Bacteria  normal  0.514045  normal  1 
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  36.02 
 
 		 215 aa  123  2e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal  1 
 
 
-
 
NC_010557  BamMC406_6196  two component LuxR family transcriptional regulator  36.84 
 
 		 215 aa  123  2e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.280791  normal  0.522243 
 
 
-
 
NC_010087  Bmul_5903  two component LuxR family transcriptional regulator  33.65 
 
 		 215 aa  123  2e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.68975  normal  0.398777 
 
 
-
 
NC_008061  Bcen_4002  two component LuxR family transcriptional regulator  35.58 
 
 		 215 aa  123  2e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A2902  two component LuxR family transcriptional regulator  36.02 
 
 		 212 aa  123  2e-27  Methylibium petroleiphilum PM1  Bacteria  normal  0.255362  normal  1 
 
 
-
 
NC_009078  BURPS1106A_A1154  LuxR family DNA-binding response regulator  34.62 
 
 		 215 aa  122  3e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  0.324728  n/a   
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  34.62 
 
 		 215 aa  122  3e-27  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_007511  Bcep18194_B1652  two component LuxR family transcriptional regulator  35.55 
 
 		 215 aa  122  3e-27  Burkholderia sp. 383  Bacteria  normal  0.187578  normal  0.308689 
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  34.62 
 
 		 215 aa  122  3e-27  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II1570  LuxR family DNA-binding response regulator  34.62 
 
 		 215 aa  122  3e-27  Burkholderia thailandensis E264  Bacteria  normal  0.17909  n/a   
 
 
-
 
NC_008835  BMA10229_0760  LuxR family DNA-binding response regulator  34.62 
 
 		 215 aa  122  3e-27  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1228  LuxR family DNA-binding response regulator  34.62 
 
 		 215 aa  122  3e-27  Burkholderia pseudomallei 668  Bacteria  normal  0.0904383  n/a   
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  35.55 
 
 		 215 aa  122  4e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal  1 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  35.1 
 
 		 215 aa  122  4e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  35.55 
 
 		 215 aa  122  4e-27  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.329832 
 
 
-
 
NC_010515  Bcenmc03_5989  two component LuxR family transcriptional regulator  35.1 
 
 		 215 aa  122  6e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008543  Bcen2424_4365  two component LuxR family transcriptional regulator  35.1 
 
 		 215 aa  122  6e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  0.902614  normal  1 
 
 
-
 
NC_007435  BURPS1710b_A2427  LuxR family DNA-binding response regulator  34.62 
 
 		 282 aa  121  7e-27  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  35.07 
 
 		 215 aa  121  8e-27  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_008543  Bcen2424_3595  two component LuxR family transcriptional regulator  35.24 
 
 		 215 aa  120  9.999999999999999e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_4108  two component transcriptional regulator, LuxR family  34.27 
 
 		 210 aa  119  3.9999999999999996e-26  Variovorax paradoxus S110  Bacteria  normal  0.755468  n/a   
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  34.76 
 
 		 215 aa  119  3.9999999999999996e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  34.6 
 
 		 213 aa  118  4.9999999999999996e-26  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0849  two component LuxR family transcriptional regulator  30.77 
 
 		 209 aa  118  6e-26  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  33.81 
 
 		 211 aa  117  9e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  34.62 
 
 		 214 aa  116  1.9999999999999998e-25  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  33.33 
 
 		 214 aa  116  3e-25  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_008322  Shewmr7_1614  response regulator  34.98 
 
 		 214 aa  115  3.9999999999999997e-25  Shewanella sp. MR-7  Bacteria  unclonable  0.000000746753  normal  0.505035 
 
 
-
 
NC_008577  Shewana3_1608  response regulator  34.16 
 
 		 214 aa  115  5e-25  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000660452  normal  0.150334 
 
 
-
 
NC_008321  Shewmr4_1547  response regulator  34.16 
 
 		 214 aa  115  5e-25  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000288339  normal  1 
 
 
-
 
NC_004347  SO_1860  response regulator  34.16 
 
 		 214 aa  115  6e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_2677  response regulator  34.16 
 
 		 214 aa  115  6e-25  Shewanella baltica OS195  Bacteria  normal  0.0738952  normal  0.957867 
 
 
-
 
NC_011663  Sbal223_1782  response regulator  34.16 
 
 		 214 aa  115  6e-25  Shewanella baltica OS223  Bacteria  normal  0.0381154  hitchhiker  0.0000000750596 
 
 
-
 
NC_009665  Shew185_2600  response regulator  34.16 
 
 		 214 aa  115  6e-25  Shewanella baltica OS185  Bacteria  hitchhiker  0.000388579  n/a   
 
 
-
 
NC_009052  Sbal_2562  response regulator  34.16 
 
 		 214 aa  115  6e-25  Shewanella baltica OS155  Bacteria  normal  0.0171044  n/a   
 
 
-
 
NC_009901  Spea_1953  response regulator  34.98 
 
 		 214 aa  114  6.9999999999999995e-25  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00404481  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  32.69 
 
 		 215 aa  114  7.999999999999999e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  32.69 
 
 		 215 aa  114  7.999999999999999e-25  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
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