Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00809 |
Symbol | RSp0381 |
ID | 1222688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 485192 |
End bp | 485824 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637240241 |
Product | transcription regulator protein |
Protein accession | NP_521942 |
Protein GI | 17548602 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACG TCCTCATCGT CGAACCGCAC GATATCGCCC GCACGGGCCT GCGCCAGATC CTGAAGGATT CGCGCCTGGC CCGGCAGATC GAAGCCGTAC CGGATTTGTC CGGAAACCCG GGCCTGCTCG ACCAGCGCGA GTGGGACGTC CTGCTGTTTT CCGTCGAATC GGCCAGCGGC GACGAGTTCC AGACCATCAA GGCGGTCCGC CAGCAGCACG CGCGCCTGGC GGTGCTGGCG ATGGGCCGCC ACCCGGAGGC GCTGCTCGCC GTGCGCGCGC TCAAGGCCGG CGCCTCCGGC TACCTGCCGA TGAACGCCAC CCAGCCGCAG CTGCTGGCGG CCGTCAACGC CATCTCCAAG GGCAAGAAAT ACCTGCCCCC GGACCTGGTC GAAGTGCTGG CCGACAACCT GAACGTGGAT TGGGACAAGC CGCGCCATGA CGTGCTGTCC GACCGCGAAT TCCAGACGCT GCGCATGCTG GGCTCGGGCC GCACGCTGGG CGAGATCGCC GACGCGCTGC AGATCAGCGC CAAGACGGTC AGCGTGTACC GTGGGCGCGT CCTGGCGAAG ATGAGGCTGC GCAACAACGC GGAGCTGACC ATGTACGTCG TCAGCAACGG GCTCCAGCTG TAG
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Protein sequence | MLNVLIVEPH DIARTGLRQI LKDSRLARQI EAVPDLSGNP GLLDQREWDV LLFSVESASG DEFQTIKAVR QQHARLAVLA MGRHPEALLA VRALKAGASG YLPMNATQPQ LLAAVNAISK GKKYLPPDLV EVLADNLNVD WDKPRHDVLS DREFQTLRML GSGRTLGEIA DALQISAKTV SVYRGRVLAK MRLRNNAELT MYVVSNGLQL
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