More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_1626 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_1626  extracellular solute-binding protein  100 
 
 
327 aa  646    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.536801  normal  0.13632 
 
 
-
 
NC_010725  Mpop_3421  extracellular solute-binding protein family 3  81.64 
 
 
306 aa  424  1e-117  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3550  extracellular solute-binding protein family 3  79.69 
 
 
307 aa  417  9.999999999999999e-116  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.73273 
 
 
-
 
NC_010172  Mext_3226  extracellular solute-binding protein  79.07 
 
 
307 aa  417  9.999999999999999e-116  Methylobacterium extorquens PA1  Bacteria  normal  0.0831998  normal  0.589747 
 
 
-
 
NC_010511  M446_3770  extracellular solute-binding protein  72.98 
 
 
295 aa  412  1e-114  Methylobacterium sp. 4-46  Bacteria  normal  0.169569  normal  0.253377 
 
 
-
 
NC_011894  Mnod_2860  extracellular solute-binding protein family 3  75.57 
 
 
279 aa  410  1e-113  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.107141  n/a   
 
 
-
 
NC_011004  Rpal_5167  extracellular solute-binding protein family 3  50.9 
 
 
318 aa  277  2e-73  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0729  extracellular solute-binding protein  46.45 
 
 
318 aa  268  7e-71  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.446742  normal  0.30254 
 
 
-
 
NC_009485  BBta_0788  putative ABC transporter, periplasmic amino acid-binding protein  46.18 
 
 
302 aa  268  1e-70  Bradyrhizobium sp. BTAi1  Bacteria  normal  hitchhiker  0.00334731 
 
 
-
 
NC_007958  RPD_0999  extracellular solute-binding protein  50 
 
 
304 aa  262  4.999999999999999e-69  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.584157 
 
 
-
 
NC_007406  Nwi_0150  extracellular solute-binding protein  46.13 
 
 
306 aa  262  6.999999999999999e-69  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.975549 
 
 
-
 
NC_007964  Nham_0202  extracellular solute-binding protein  49.01 
 
 
306 aa  256  5e-67  Nitrobacter hamburgensis X14  Bacteria  normal  0.725948  n/a   
 
 
-
 
NC_007778  RPB_0887  extracellular solute-binding protein  49.6 
 
 
290 aa  252  7e-66  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0266  extracellular solute-binding protein  45.28 
 
 
292 aa  219  7e-56  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_3023  extracellular solute-binding protein family 3  43.2 
 
 
294 aa  214  1.9999999999999998e-54  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009720  Xaut_2383  extracellular solute-binding protein  41.53 
 
 
317 aa  204  2e-51  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0135  extracellular solute-binding protein  38.35 
 
 
283 aa  188  1e-46  Sinorhizobium medicae WSM419  Bacteria  normal  0.798842  normal  0.332804 
 
 
-
 
NC_011369  Rleg2_0186  extracellular solute-binding protein family 3  39.85 
 
 
291 aa  182  7e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0215  extracellular solute-binding protein family 3  40.32 
 
 
291 aa  177  2e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.195827  normal  0.274459 
 
 
-
 
NC_004310  BR0295  amino acid ABC transporter, periplasmic amino acid-binding protein  37.73 
 
 
280 aa  174  1.9999999999999998e-42  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0308  amino acid ABC transporter, periplasmic amino acid-binding protein  37.73 
 
 
280 aa  174  2.9999999999999996e-42  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0578  ABC transporter substrate binding protein (amino acid)  38.4 
 
 
306 aa  169  4e-41  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0015  extracellular solute-binding protein  33.58 
 
 
279 aa  168  1e-40  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0378  extracellular solute-binding protein  35.16 
 
 
282 aa  167  2.9999999999999998e-40  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0425  extracellular solute-binding protein  35.1 
 
 
319 aa  140  1.9999999999999998e-32  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.495581  normal 
 
 
-
 
NC_010511  M446_6191  extracellular solute-binding protein  33.63 
 
 
262 aa  129  6e-29  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4274  extracellular solute-binding protein  29 
 
 
258 aa  118  9.999999999999999e-26  Sinorhizobium medicae WSM419  Bacteria  normal  0.0882363  normal 
 
 
-
 
NC_011666  Msil_1067  extracellular solute-binding protein family 3  27.78 
 
 
294 aa  117  1.9999999999999998e-25  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0464798 
 
 
-
 
NC_009832  Spro_1655  cationic amino acid ABC transporter, periplasmic binding protein  30.7 
 
 
243 aa  115  6.9999999999999995e-25  Serratia proteamaculans 568  Bacteria  normal  normal  0.568539 
 
 
-
 
NC_011894  Mnod_6710  extracellular solute-binding protein family 3  33.19 
 
 
256 aa  116  6.9999999999999995e-25  Methylobacterium nodulans ORS 2060  Bacteria  decreased coverage  0.000229164  n/a   
 
 
-
 
NC_012917  PC1_1701  cationic amino acid ABC transporter, periplasmic binding protein  31.14 
 
 
243 aa  115  8.999999999999998e-25  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0117133  n/a   
 
 
-
 
NC_009708  YpsIP31758_2626  arginine ABC transporter, periplasmic substrate-binding protein ArtI  32.46 
 
 
243 aa  114  2.0000000000000002e-24  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.359067  n/a   
 
 
-
 
NC_010465  YPK_2711  cationic amino acid ABC transporter, periplasmic binding protein  32.46 
 
 
243 aa  114  2.0000000000000002e-24  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1582  arginine ABC transporter periplasmic substrate-binding protein ArtI  32.46 
 
 
243 aa  114  2.0000000000000002e-24  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4485  extracellular solute-binding protein family 3  26.75 
 
 
268 aa  114  2.0000000000000002e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.8611  normal 
 
 
-
 
NC_013421  Pecwa_1967  cationic amino acid ABC transporter, periplasmic binding protein  30.7 
 
 
243 aa  112  1.0000000000000001e-23  Pectobacterium wasabiae WPP163  Bacteria  normal  0.471515  n/a   
 
 
-
 
NC_012854  Rleg_6436  extracellular solute-binding protein family 3  26.32 
 
 
268 aa  111  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  decreased coverage  0.00118461 
 
 
-
 
NC_011353  ECH74115_1023  arginine ABC transporter, periplasmic arginine-binding protein ArtI  29.39 
 
 
243 aa  110  3e-23  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.916151 
 
 
-
 
NC_009436  Ent638_1379  cationic amino acid ABC transporter, periplasmic binding protein  28.63 
 
 
243 aa  108  1e-22  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_00868  arginine transporter subunit  28.95 
 
 
243 aa  107  2e-22  Escherichia coli BL21(DE3)  Bacteria  normal  0.208844  n/a   
 
 
-
 
NC_009801  EcE24377A_0936  arginine ABC transporter, periplasmic arginine-binding protein ArtI  28.95 
 
 
243 aa  107  2e-22  Escherichia coli E24377A  Bacteria  normal  0.570643  n/a   
 
 
-
 
CP001637  EcDH1_2779  cationic amino acid ABC transporter, periplasmic binding protein  28.95 
 
 
243 aa  107  2e-22  Escherichia coli DH1  Bacteria  normal  0.0149314  n/a   
 
 
-
 
NC_010658  SbBS512_E2468  arginine ABC transporter, periplasmic arginine-binding protein ArtI  28.95 
 
 
243 aa  107  2e-22  Shigella boydii CDC 3083-94  Bacteria  normal  0.381979  n/a   
 
 
-
 
NC_009800  EcHS_A0967  arginine ABC transporter, periplasmic arginine-binding protein ArtI  28.95 
 
 
243 aa  107  2e-22  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2377  cationic amino acid ABC transporter, periplasmic binding protein  30.43 
 
 
243 aa  108  2e-22  Dickeya zeae Ech1591  Bacteria  normal  0.730778  n/a   
 
 
-
 
NC_012892  B21_00874  hypothetical protein  28.95 
 
 
243 aa  107  2e-22  Escherichia coli BL21  Bacteria  normal  0.183806  n/a   
 
 
-
 
NC_010468  EcolC_2733  cationic amino acid ABC transporter, periplasmic binding protein  28.19 
 
 
243 aa  107  2e-22  Escherichia coli ATCC 8739  Bacteria  normal  0.0727882  normal 
 
 
-
 
NC_010498  EcSMS35_0891  arginine ABC transporter, periplasmic arginine-binding protein ArtI  28.63 
 
 
243 aa  107  3e-22  Escherichia coli SMS-3-5  Bacteria  normal  0.437353  normal 
 
 
-
 
NC_011083  SeHA_C1025  arginine ABC transporter periplasmic arginine-binding protein ArtI  28.63 
 
 
243 aa  106  5e-22  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0962  arginine ABC transporter periplasmic arginine-binding protein ArtI  28.63 
 
 
245 aa  106  5e-22  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0994  arginine ABC transporter periplasmic arginine-binding protein ArtI  28.63 
 
 
243 aa  106  5e-22  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.633483  normal 
 
 
-
 
NC_011094  SeSA_A1044  arginine ABC transporter periplasmic arginine-binding protein ArtI  28.63 
 
 
243 aa  106  5e-22  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.180668  normal 
 
 
-
 
NC_011149  SeAg_B0927  arginine ABC transporter, periplasmic arginine-binding protein ArtI  28.63 
 
 
245 aa  106  5e-22  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2277  cationic amino acid ABC transporter, periplasmic binding protein  29.82 
 
 
243 aa  105  9e-22  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1588  extracellular solute-binding protein  26.18 
 
 
260 aa  105  1e-21  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0708  extracellular solute-binding protein  30.04 
 
 
264 aa  105  1e-21  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.956063  n/a   
 
 
-
 
NC_008542  Bcen2424_1187  extracellular solute-binding protein  30.04 
 
 
264 aa  105  1e-21  Burkholderia cenocepacia HI2424  Bacteria  normal  0.708736  n/a   
 
 
-
 
NC_010084  Bmul_2118  extracellular solute-binding protein  30.47 
 
 
264 aa  104  2e-21  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1449  extracellular solute-binding protein family 3  30.77 
 
 
258 aa  104  2e-21  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2064  lysine-arginine-ornithine-binding periplasmic protein  27.59 
 
 
259 aa  104  2e-21  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2163  cationic amino acid ABC transporter, periplasmic binding protein  30.38 
 
 
258 aa  104  2e-21  Burkholderia phymatum STM815  Bacteria  normal  0.0442479  decreased coverage  0.0000000159985 
 
 
-
 
NC_009456  VC0395_0700  arginine ABC transporter, periplasmic arginine-binding protein  28.19 
 
 
243 aa  104  2e-21  Vibrio cholerae O395  Bacteria  normal  0.347684  n/a   
 
 
-
 
NC_010508  Bcenmc03_1163  extracellular solute-binding protein  30.04 
 
 
264 aa  104  2e-21  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.516909  normal  0.0605845 
 
 
-
 
NC_010581  Bind_1787  extracellular solute-binding protein  26.2 
 
 
281 aa  102  1e-20  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.571059  normal 
 
 
-
 
NC_008254  Meso_1562  extracellular solute-binding protein  24.68 
 
 
261 aa  101  1e-20  Chelativorans sp. BNC1  Bacteria  normal  0.470134  n/a   
 
 
-
 
NC_009784  VIBHAR_05529  ABC amino acid transporter periplasmic ligand binding protein  28.44 
 
 
247 aa  100  2e-20  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009832  Spro_3207  extracellular solute-binding protein  29.36 
 
 
263 aa  101  2e-20  Serratia proteamaculans 568  Bacteria  normal  normal  0.0476273 
 
 
-
 
NC_007510  Bcep18194_A4297  ABC transporter, periplasmic ligand binding protein  29.61 
 
 
264 aa  100  3e-20  Burkholderia sp. 383  Bacteria  normal  normal  0.173151 
 
 
-
 
NC_008463  PA14_52790  arginine/ornithine binding protein AotJ  28.45 
 
 
259 aa  100  3e-20  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2491  extracellular solute-binding protein family 3  28.21 
 
 
258 aa  100  4e-20  Dickeya dadantii Ech703  Bacteria  normal  0.38007  n/a   
 
 
-
 
NC_009668  Oant_4365  extracellular solute-binding protein  25.11 
 
 
264 aa  100  5e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012854  Rleg_6395  extracellular solute-binding protein family 3  27.9 
 
 
257 aa  99.8  5e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.45445 
 
 
-
 
NC_009656  PSPA7_4626  arginine/ornithine binding protein AotJ  28.45 
 
 
259 aa  99.8  5e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5842  extracellular solute-binding protein family 3  29.96 
 
 
261 aa  100  5e-20  Variovorax paradoxus S110  Bacteria  normal  0.742895  n/a   
 
 
-
 
NC_012917  PC1_1698  cationic amino acid ABC transporter, periplasmic binding protein  29.07 
 
 
243 aa  99.8  5e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.176126  n/a   
 
 
-
 
NC_010086  Bmul_5139  extracellular solute-binding protein  30.6 
 
 
260 aa  99.8  6e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.900284 
 
 
-
 
NC_009439  Pmen_2916  cationic amino acid ABC transporter, periplasmic binding protein  29.02 
 
 
257 aa  98.6  1e-19  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0769727 
 
 
-
 
NC_011312  VSAL_I1958  arginine/ornithine periplasmic binding protein-dependent transporter  27.43 
 
 
258 aa  98.6  1e-19  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.488249  n/a   
 
 
-
 
NC_010623  Bphy_3780  cationic amino acid ABC transporter, periplasmic binding protein  27.66 
 
 
260 aa  98.6  1e-19  Burkholderia phymatum STM815  Bacteria  normal  0.219824  normal 
 
 
-
 
NC_010551  BamMC406_1067  extracellular solute-binding protein  30.04 
 
 
264 aa  98.6  1e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  0.358006  normal 
 
 
-
 
NC_008709  Ping_2833  ABC amino acid transporter extracellular solute-binding protein, family 3  27.27 
 
 
258 aa  98.6  1e-19  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001573  arginine ABC transporter periplasmic arginine-binding protein ArtI  27.88 
 
 
247 aa  98.2  2e-19  Vibrio sp. Ex25  Bacteria  normal  0.74719  n/a   
 
 
-
 
NC_009076  BURPS1106A_2777  lysine-arginine-ornithine-binding periplasmic protein  28.76 
 
 
264 aa  97.8  2e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  0.262545  n/a   
 
 
-
 
NC_006348  BMA0598  amino acid ABC transporter, periplasmic amino acid-binding protein  28.76 
 
 
264 aa  97.8  2e-19  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1729  amino acid ABC transporter, periplasmic amino acid-binding protein  28.76 
 
 
264 aa  97.8  2e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  0.133589  n/a   
 
 
-
 
NC_007434  BURPS1710b_2839  amino acid ABC transporter, periplasmic amino acid-binding protein  28.76 
 
 
264 aa  97.8  2e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2214  extracellular solute-binding protein  23.89 
 
 
268 aa  97.8  2e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1964  cationic amino acid ABC transporter, periplasmic binding protein  29.07 
 
 
243 aa  97.8  2e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  0.822983  n/a   
 
 
-
 
NC_007651  BTH_I1783  amino acid ABC transporter, periplasmic amino acid-binding protein  29.18 
 
 
264 aa  97.8  2e-19  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2873  amino acid ABC transporter, periplasmic amino acid-binding protein  28.76 
 
 
264 aa  97.8  2e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  0.223269  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2417  amino acid ABC transporter, periplasmic amino acid-binding protein  28.76 
 
 
264 aa  97.8  2e-19  Burkholderia mallei SAVP1  Bacteria  normal  0.131702  n/a   
 
 
-
 
NC_007434  BURPS1710b_1248  amino acid ABC transporter, periplasmic amino acid-binding protein  29.36 
 
 
324 aa  97.4  3e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  0.672597  n/a   
 
 
-
 
NC_007908  Rfer_1525  extracellular solute-binding protein  26.16 
 
 
255 aa  97.4  3e-19  Rhodoferax ferrireducens T118  Bacteria  normal  0.490796  n/a   
 
 
-
 
NC_009668  Oant_3710  extracellular solute-binding protein  26.5 
 
 
253 aa  97.4  3e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.33118  n/a   
 
 
-
 
NC_009074  BURPS668_2719  lysine-arginine-ornithine-binding periplasmic protein  28.76 
 
 
264 aa  97.4  3e-19  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_1067  extracellular solute-binding protein  30.04 
 
 
264 aa  97.4  3e-19  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1652  cationic amino acid ABC transporter, periplasmic binding protein  29.69 
 
 
244 aa  97.4  3e-19  Serratia proteamaculans 568  Bacteria  normal  normal  0.513751 
 
 
-
 
NC_010557  BamMC406_6020  extracellular solute-binding protein  30.17 
 
 
264 aa  97.1  4e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1928  extracellular solute-binding protein  22.98 
 
 
265 aa  96.7  4e-19  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.402085 
 
 
-
 
NC_011368  Rleg2_4531  extracellular solute-binding protein family 3  27.47 
 
 
257 aa  96.7  5e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.417135  normal  0.112125 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>