| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6436 |
|---|
| Symbol | |
|---|
| ID | 8016935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012854 |
|---|
| Strand | - |
|---|
| Start bp | 154440 |
|---|
| End bp | 155246 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644828231 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_002979431 |
|---|
| Protein GI | 241554218 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.00118461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGCA TATCCATTCA GACCATATTG CGCGGAACGC TGATGGCGGG CGGGATCGGT
GTCTTGTTAG CGGCGGCCGC GCCGCTCGAG CTGGCTGCGC AGGATCGCAT GCCAATGAGA
ATTGCCGTCG AAGGTGCATT TCCGCCCTTC AACTATCTCG ATTCAAACAA CAAGCTTCAG
GGCTTCGATA TCGATATTGC CAATGCGCTG TGCGAGGTCG GCAAGTTTGA ATGCCAATTT
ATCATCGAGA AGTGGGACGA CATCATCCCC GATCTCGTTG CCGACAAATA CGACGCGATC
ATCTCATCCA TGTCGATGAG CCTTGAGCGG CGTCAAAAGG TTGCCTTCAC TGAAAAATAC
TACAACAGCC CGTCGGTGTT CATCGCCCGG AAGGATTCGT CGATCAGCGA TGTCAGCCCC
GCCGCCCTCA GCGACAAAAT TCTTGGGGTG ACGTCGTCGA CAGCGCAGGA ATCCTATGCC
AACCATCTTT ATCCGGCAAT GAAAAAGACG GTGTTTCGGT CTTCGCCGGA ATTGTACAAG
GGTCTGGCGG ATGGGAGCGT CGACATTATC CTCGAGGATA AACTGGCCAT CTATGATTGG
ATTGCCAACA CCAAGGCTGG AAGCTGCTGC GAGTTCAAGG GGCCGGACCT GGTCGACGTC
ACCTATTTTG GTGAAGGCGC CGGTATAGCG CTGCGCTTGG ATGACAAGGA GCGTCTGACA
CGTCTGAACG AAGCGTTGAA GAGCATCCAG GCGGACGGAA CCTATGACAT GATCAACGCC
AAATATTTCC CGTTCAGCAT CCAGTAG
|
|---|
| Protein sequence | MLRISIQTIL RGTLMAGGIG VLLAAAAPLE LAAQDRMPMR IAVEGAFPPF NYLDSNNKLQ
GFDIDIANAL CEVGKFECQF IIEKWDDIIP DLVADKYDAI ISSMSMSLER RQKVAFTEKY
YNSPSVFIAR KDSSISDVSP AALSDKILGV TSSTAQESYA NHLYPAMKKT VFRSSPELYK
GLADGSVDII LEDKLAIYDW IANTKAGSCC EFKGPDLVDV TYFGEGAGIA LRLDDKERLT
RLNEALKSIQ ADGTYDMINA KYFPFSIQ
|
|---|
| |