Gene RPC_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0729 
Symbol 
ID3970551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp797077 
End bp798033 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content66% 
IMG OID637923844 
Productextracellular solute-binding protein 
Protein accessionYP_530619 
Protein GI90422249 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.446742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.30254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTATA AGACCCGACC GGCGCGGACC TCCTCAATGC AACCACGGAT TGTTTTGATC 
ATCAACGACA GATTGCTGTG CCGCGCCCGT GCAACCGCGA TCGCGGCGCT ATCGCTCGGG
CTGCTGCTGG TGGGCGCGCC GCTCGCCCCG GCAATTGCGC AGGCCCCCGC CAAGGGCGTG
TCGCAGCCGG CGCCGAAAGC GGTGCCGAGC TTCTGGGATC CGCGACGGCG GCCGGAGCGG
CCGGACCTGT CGCGGCTCAC CGTGATCCGC TTTCTCACCG AAACCGATTA TCCGCCGTTC
AACTTCACCG GCGCCGATGG CAATCCGGCG GGCTTCAATG TCGATCTGGC GCGGGCGTTG
TGCGAGGAGA TCAAGGTCAC CTGCACGGTG CAGATGCGCC GCTTCGAGAC CCTGCTCGAT
GCGGTCGCCA GCAACCGCGG CGACGCCATC ATCGCCTCCT TGGCGGTGAC GCCGCAGATG
CGCGCCCGGG TGGATTTCAC CGATCCGTAT TACCGCGCCC CGGCGCGCTT CGTGTCGCGC
AAGGACGGCG TGCTGGCCGA GATGCGGCCG GAATATCTCG AGGGCAAGAA GGTCGGCGCG
ATCAGTGGCT CCTCGCACGA GGCCTATCTG AAAGTGATGT TCACCGACGC CGAGCTGGTG
CCCTATCCGA ACGACGACGC GCTGCGCGCC GCACTGCGCC GCGGCGAGGT CGACTACATC
TTCGGCGACG CCATCTCGCT GGCGTTCTGG ATCAACGGCA CCGATTCCGC GGATTGCTGC
GCGTTTTCCG GCGGCCCGTT CGTCGAAAGC CGGTATTTCG GCGAGGGCGT CGGCATCGCG
GTCCGCAAGG GCAACGATCT GTTGCGCCAG GCCTTGAACT GGGCGCTGTT CCGGGTCTGG
GAAAAAGGCC GCTACACCGA CCTCTGGCTG CGCTATTTTT CCGTCAGCCC GTTCTAA
 
Protein sequence
MVYKTRPART SSMQPRIVLI INDRLLCRAR ATAIAALSLG LLLVGAPLAP AIAQAPAKGV 
SQPAPKAVPS FWDPRRRPER PDLSRLTVIR FLTETDYPPF NFTGADGNPA GFNVDLARAL
CEEIKVTCTV QMRRFETLLD AVASNRGDAI IASLAVTPQM RARVDFTDPY YRAPARFVSR
KDGVLAEMRP EYLEGKKVGA ISGSSHEAYL KVMFTDAELV PYPNDDALRA ALRRGEVDYI
FGDAISLAFW INGTDSADCC AFSGGPFVES RYFGEGVGIA VRKGNDLLRQ ALNWALFRVW
EKGRYTDLWL RYFSVSPF