| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0135 |
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| Symbol | |
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| ID | 5320965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 149658 |
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| End bp | 150509 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789069 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001325830 |
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| Protein GI | 150395363 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.798842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.332804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGCG CATTCTTTCT GCGAATTTGC CGGATCTTCC TTCTCTCGGC CGTTCTTGGT
GCCGGATCTG CCATGGCGCA GCCCAAGGAT CTGCCCAGGC TTTTTGACGC TCGCGAGCGC
ATTGCAAGGC CCGACTTGAG CGGGCTTGCC AGGCTTCGCT TCCTGACGAC GGTCGATTTC
CCGCCCTTCA ATTTCATCGA TCAATCGGGC AAGCTGTCGG GCTTCCATGT CGACCTTGCC
CGCGAGATCT GCCGGGAGCT GGAGATCGAG GCAAAATGCC AGATCCAGGC GGTGACCTAT
CCGGAGCTCA TGCCTGCACT CGAACAGGGA CAGGGCGAAG CGATCGCCGC CGGGATCTCC
GTGACTTCGG AGTTGAGGCA GCGTTTCGCC TTCTCCCGAG CCTTCATGCA ACTGCCGGCC
CGCTTCGTCG TCAACACGAA GGCTGCACCT GCGATCACCG GGCCTGCCGA TCTCGCGCAG
AGGCCCGTCG GCGTCGTTTC CGGCACCATC CATGAGGCCA TGCTGAAGGC GTTCTTCCCC
GAGCTCGAGG CGAAAGGGTT TTCCGACCGG GATTCGCTGC TTTCCGCGCT TCGCGAGGGG
GCGGTTGCGG CTGCATTTTC CGACGGAATG CAGCTTTCCT TCTGGGTATC CGGCAGCCTG
GCCGGGGGAT GCTGCGCCGT GATTGAAGGC TCCTATTTCT CCCAACGGTT CCTCGGCGAG
GGGCTGACGA TCATGAACCG AAAGGCCGAG CCTGCCCTCA CTCAGGCGAT CGACCATGCG
CTTTTGGCGC TCTCACGCAG CGGCAGGCTC GAGGAGATCT ACCTGCGCTA TTTTCCGAAT
GGGATTTATT AG
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| Protein sequence | MPSAFFLRIC RIFLLSAVLG AGSAMAQPKD LPRLFDARER IARPDLSGLA RLRFLTTVDF
PPFNFIDQSG KLSGFHVDLA REICRELEIE AKCQIQAVTY PELMPALEQG QGEAIAAGIS
VTSELRQRFA FSRAFMQLPA RFVVNTKAAP AITGPADLAQ RPVGVVSGTI HEAMLKAFFP
ELEAKGFSDR DSLLSALREG AVAAAFSDGM QLSFWVSGSL AGGCCAVIEG SYFSQRFLGE
GLTIMNRKAE PALTQAIDHA LLALSRSGRL EEIYLRYFPN GIY
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