| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05529 |
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| Symbol | |
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| ID | 5558597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 736716 |
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| End bp | 737459 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640910006 |
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| Product | ABC amino acid transporter periplasmic ligand binding protein |
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| Protein accession | YP_001447660 |
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| Protein GI | 156976754 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA TTTTACTAGC TTCACTAATC GGCCTTTCTT CTGCAACCAT GGCAGCGAAC
GCAGCAGCAC AAGAAGAGAT CAAATTCGCG ATGGAAGCGA CTTACGCACC GTTCGAATAC
ATGGATGAAA ACAACCAAAT CCAAGGTTTT GACGTGGATC TGGCGAACGC ACTATGTAAA
GAAATGGAAG CACAATGTAC CTTCCACAAC CAATCTTTTG ACAGCCTGAT CCCTGCATTA
AAATTCAAGC GTTACGATGC GGCTATCTCT GCAATGGATA TTACTGACGC GCGTTTGGAG
CAAGTGAACT TTTCTGCCCC TTACTACGAC AACTCAGCAG CGTTTGTTTC TATCAAAGAA
AAAGTGGCCG ATCAAAAAGC ACTAGAAGGT AAGCGTGTTG GTGTTCAAAA CGGTTCAACA
CACCAAAGCT ACCTGATCGA GCAAATGCCA GGTGTAACAG CGGTTCCTTA CTCAAGCTAC
CAAGACGCAT TCATCGATAT GAAGAATGGC CGTATTGATT CTGTATTCGG TGACACAGCA
GTTGTAGCGG AATGGTTCAA GAAAGAAAAC AACCTAGCGT ACGTGGGCGA GCACGTTACT
AACCCTAAAT ACTTCGGTAA CGGTTTCGGT ATCGCAGTAA ACAAAGGTAA CGACGAGCTA
GTGAACAAGC TGAACACGGC ACTGAAAACA GTGAAAGCGA ACGGCGAATA CGACGTAATC
TACAACAAGT ACTTCGGTAA GTAA
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| Protein sequence | MKKILLASLI GLSSATMAAN AAAQEEIKFA MEATYAPFEY MDENNQIQGF DVDLANALCK
EMEAQCTFHN QSFDSLIPAL KFKRYDAAIS AMDITDARLE QVNFSAPYYD NSAAFVSIKE
KVADQKALEG KRVGVQNGST HQSYLIEQMP GVTAVPYSSY QDAFIDMKNG RIDSVFGDTA
VVAEWFKKEN NLAYVGEHVT NPKYFGNGFG IAVNKGNDEL VNKLNTALKT VKANGEYDVI
YNKYFGK
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