| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0578 |
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| Symbol | |
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| ID | 7388975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 498658 |
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| End bp | 499578 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650203 |
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| Product | ABC transporter substrate binding protein (amino acid) |
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| Protein accession | YP_002548415 |
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| Protein GI | 222147458 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAATGA GCCGGTTGAA AGTTACATCC CTGAAAACCA AGGGGCGCAT GAAGGCAATC
ACTGTATTGG CTGCTTTGAC CTGTGGTGTG CTGCCTTTTC TATCCCTAGG TCTCGCACCC
TTGCCTGTTC AGGCACAGGC GCTTCCGTCC CAGCAATCGG TGCCGGTCCT GTTCGATGCG
CGGGCGCGGT TGCCGAAGCC GGATCTATCG GTGCTGCTGC GATTGCGGTT TCTCACAACG
GTGGATTTTC CACCCTTCAG TTTTCTCGAT CAGACCGGCC ATTTGACCGG CTATAATATT
GACCTGGTGC GGGAGATCTG CCGCGAACTG GATGTCGAGG CGAAATGCGA GGTTCAGGCC
GTGCCCTTTT CCGATATGGA AATCGCGTTG CTGAGCAAGC ATGGCGATGC TGCGGTGGCG
GGCATGGCGG TGACGGCAGG GTTGCGGCGG GATTTTGCCT TTTCCAGACC TTATCTGATG
TTGCCGGCCC GTTTCGTTGT GCCGCGTGAC AATCTCGGCA AGGCCGATAC GCCTGCGGCA
TTGGCCGGAA AGCCGGTTGG TATCGTCACG GGCACGGCGC AGGAGGCCAT GCTGAAAGCA
TTTTTCCCGG CGATCACGCC GGTGGGTTTT GCCGATCAGG CCGCCTTGAT GGATGCGCTG
AAACAGAAAA AAATCCAGGC GGCCTTCGCC GATGGATTGC AGCTCTCGTT TTGGCTGGCC
AGTGCCTCAT CCGCCCAATG CTGCGCTTTC CTGGGAGGCC CTTTTCTATC GCAGCAGTTT
CTCGGCGAAG GCATGACCAT CATGGTGCGC AAGGAAGACG GCTTTCTGGC CGCCGCCTTT
GACTATGCGC TGGTCTCCCT GTCGCGCAAG GGCAGGCTGG ACGAATTGTC CCGCCGGTAT
TTTGCCGAGG GATTTTACTG A
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| Protein sequence | MIMSRLKVTS LKTKGRMKAI TVLAALTCGV LPFLSLGLAP LPVQAQALPS QQSVPVLFDA
RARLPKPDLS VLLRLRFLTT VDFPPFSFLD QTGHLTGYNI DLVREICREL DVEAKCEVQA
VPFSDMEIAL LSKHGDAAVA GMAVTAGLRR DFAFSRPYLM LPARFVVPRD NLGKADTPAA
LAGKPVGIVT GTAQEAMLKA FFPAITPVGF ADQAALMDAL KQKKIQAAFA DGLQLSFWLA
SASSAQCCAF LGGPFLSQQF LGEGMTIMVR KEDGFLAAAF DYALVSLSRK GRLDELSRRY
FAEGFY
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