Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3226 |
Symbol | |
ID | 5835539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3580704 |
End bp | 3581627 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641369026 |
Product | extracellular solute-binding protein |
Protein accession | YP_001640684 |
Protein GI | 163852641 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0831998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.589747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCAGG ACCTCTCCAT GGACGTGCAT TGCTCCACTC CGACAACCGA AGGGTCAATC CGCTACCACA GGATGCGGCG GATACTGGCG GCAACCTTTA TCGTTTTGTT AACCAATGTT GCACAGGCAC AACAGCCGTC CGACCCAGCG GCCCCGTCGG TCAGCATTCC GAACTTCTGG AATCCCCGTG CTCGCGGCGA GCGGGTCGAG GCGCCTCAGA CGGGTCGGGC GGTTCGGTTC ATGACCGACG ACGAGTTTCC GCCGCTCCAT TTCGCAGGCC CCGACGGTGT GCCGACCGGC TTTGCCGTGG AACTCGCCCG CGCGGTCTGC GAGCGGCTAA CGGTGACGTG CACGGTGCAG GCGCGCCGCT TCGACACGTT GCTCGATGCG CTGGCCGACA AGCAGGGTGA CGTCGTGGCC GCCGCCGTGC CCCTGACGCC GGGCCTGCGG GCGCGGTTCC TGGCGACGCG GCCCTATTTC CGCTGGCCGG CCCGCTTCAT CGCCCGCAAG GACCGCAGCC TGCCCGCCCC CTCGACGACT GCACTCGCCG GGCGGAACGT CGGGATCGTC GAGGGCAGCG CTCACGAGGC CTATCTGAAG GCCTTCTTCC CCAACGCCAC GCGAAAGACC TTCACCGACC TCTCGGCGGC CCAGAGCGCG CTCAAGCGCG GCGAGGTCGA GTACCTGTTC GCCGACGGCT TGAGCCTCGC GCTCTGGCTG AACGGCCAGG AGGCGGAGGG TTGCTGCACC TATTCCGGCG GCGATTATCT GGAGAATCGC TATTTCGGTG AAGGCATCGG CTTCGTCACC CGCACCGAGG ACGCGGCTTT GGCCCGTGCC CTCGACGATG CGTTGCAGCG GGTATGGGAC GACGGAAAAT ACGCCGAGCT GTATCTGCGA TTTTTTCCGA TCAGCCCGTT CTGA
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Protein sequence | MGQDLSMDVH CSTPTTEGSI RYHRMRRILA ATFIVLLTNV AQAQQPSDPA APSVSIPNFW NPRARGERVE APQTGRAVRF MTDDEFPPLH FAGPDGVPTG FAVELARAVC ERLTVTCTVQ ARRFDTLLDA LADKQGDVVA AAVPLTPGLR ARFLATRPYF RWPARFIARK DRSLPAPSTT ALAGRNVGIV EGSAHEAYLK AFFPNATRKT FTDLSAAQSA LKRGEVEYLF ADGLSLALWL NGQEAEGCCT YSGGDYLENR YFGEGIGFVT RTEDAALARA LDDALQRVWD DGKYAELYLR FFPISPF
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