| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1067 |
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| Symbol | |
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| ID | 6176720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1163788 |
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| End bp | 1164582 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680823 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001807774 |
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| Protein GI | 172060122 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.358006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGG ATTGGCGTAA AGTGGCCGCG CACGCGGTAG TGGCGGCAAC GGCCGTGGCG
GCAGGCAGCG CGATGGCGGC GGATCTGAAG GAGATCCGGT TCGGCGTGGA GGCCTCGTAC
GCGCCGTTCG AATACAAGAC GCCCGACGGC AAGCTGACCG GCTTCGACAT CGACATCGGC
AACGCGGTGT GCGCGAAGCT GAACGTGAAG TGCGTGTGGG TCGAGAACGA CTTCGACGGC
CTGATCCCCG CGCTGCAGGC GCGCAAGTTC GATGCGATCA ACTCGGACAT GACGATCACC
GACCAGCGCA AGCACGCGAT CGCGTTCACC GATCCGATCT ACACGATCCC GAACCAGCTG
ATCGCGAAGC AGGGCAGCGG CCTCCAGCCG ACCCCGCAAG CGCTGAAGGG CAAGCGGGTC
GGCGTGCTGC AGGGCACGAT CCAGGAAGCG TACGCGAAGA AGAAGTGGGC GCCGGCCGGT
GTCGAGGTCG TGCCGTACCA GACGCAGGAC CTGGCCTACG CCGACCTGAA GTCGGGCCGT
CTCGACGCGA CGTTCCAGGA TTCGGAAGCG GGCTCGAAGG GCTTCCTGTC GAAGCCGCAA
GGCCAGGGCT TCGGTTTCGC CGGCGGCACG GTGGCCGATG CCGAGATCCT CGGCTCGGGC
GTCGGCTTCG GCCTGCGCAA GAACGACGCG GCGCTGAAGA CCGCGCTCGA TCAGGCACTG
AAGGGGCTGA AGGCCGACGG CACGATCGAC AACCTCGCGA AGAAGTACTT CAGCGTGCCG
GTCACGCTCA AGTAA
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| Protein sequence | MKLDWRKVAA HAVVAATAVA AGSAMAADLK EIRFGVEASY APFEYKTPDG KLTGFDIDIG
NAVCAKLNVK CVWVENDFDG LIPALQARKF DAINSDMTIT DQRKHAIAFT DPIYTIPNQL
IAKQGSGLQP TPQALKGKRV GVLQGTIQEA YAKKKWAPAG VEVVPYQTQD LAYADLKSGR
LDATFQDSEA GSKGFLSKPQ GQGFGFAGGT VADAEILGSG VGFGLRKNDA ALKTALDQAL
KGLKADGTID NLAKKYFSVP VTLK
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