Gene Ping_2833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2833 
Symbol 
ID4626277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3481234 
End bp3482010 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content41% 
IMG OID639797955 
ProductABC amino acid transporter extracellular solute-binding protein, family 3 
Protein accessionYP_944138 
Protein GI119946458 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TGAGTATGTT GATTGCTCTC TTTACCTTGT CAGTTAATGT TGCACAGGCG 
AAACAATGGA CACAGATTCG AATTGGTGTT GAAGGTGCTT ATCCGCCCTT TAGCCAAACA
GAAGCTGATG GTAGCGTGAC CGGATTTGAT ATCGATATAG CGAATGCCTT GTGTGCTGAA
ATGAAGGCAG ACTGTACCTT AATCAAACAA GATTGGGATG GTATTATTCC TGCATTAATG
GCACGTAAAT TTGATGCGAT TGTAGCAACA ATGGATATTA CCGAAGAGCG CAAAAAACGT
GTTGCCTTTA CCAATAAATA CCAGCATATT CCGGCTCGAT TTGCGGCTTT AAAAGGGACT
GAGTATCAAG CATCTCCAGC GTTTATGGCG GGTAAAAAAG TGGGTGTACA GCGTGCAACT
TCGATGGATC TTTATATTTC TGATAACTAC CCGGAAGCTG AAATCAAACG TTATGGCTCT
GCCGATGAAG CCTATCTGGA TCTTAAAGCA GGTCGCCTAG ACTATATAAT GGCCGACTCA
GCGGCAATTA CCGGTGGCTT ATTAGAAAAA GAAGGCGGTG ATAAATTTGA ACTTGTGGGT
CCTAAACTAA ACGATCCTAA ATGGTTTGGT GAAGGTGCTG GTATTGCCGT GCGTCAACAA
GATAAAGATC TTGTTGACCA ATTTAATGCT GCTATTAAAG CGATTCGTGC CGATGGGACT
TATCAAACAA TTCAAGATAA ATACTTTACC TTTGATGTTT ATGGTAGTGA AGAATAA
 
Protein sequence
MKKMSMLIAL FTLSVNVAQA KQWTQIRIGV EGAYPPFSQT EADGSVTGFD IDIANALCAE 
MKADCTLIKQ DWDGIIPALM ARKFDAIVAT MDITEERKKR VAFTNKYQHI PARFAALKGT
EYQASPAFMA GKKVGVQRAT SMDLYISDNY PEAEIKRYGS ADEAYLDLKA GRLDYIMADS
AAITGGLLEK EGGDKFELVG PKLNDPKWFG EGAGIAVRQQ DKDLVDQFNA AIKAIRADGT
YQTIQDKYFT FDVYGSEE