Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2833 |
Symbol | |
ID | 4626277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3481234 |
End bp | 3482010 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639797955 |
Product | ABC amino acid transporter extracellular solute-binding protein, family 3 |
Protein accession | YP_944138 |
Protein GI | 119946458 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TGAGTATGTT GATTGCTCTC TTTACCTTGT CAGTTAATGT TGCACAGGCG AAACAATGGA CACAGATTCG AATTGGTGTT GAAGGTGCTT ATCCGCCCTT TAGCCAAACA GAAGCTGATG GTAGCGTGAC CGGATTTGAT ATCGATATAG CGAATGCCTT GTGTGCTGAA ATGAAGGCAG ACTGTACCTT AATCAAACAA GATTGGGATG GTATTATTCC TGCATTAATG GCACGTAAAT TTGATGCGAT TGTAGCAACA ATGGATATTA CCGAAGAGCG CAAAAAACGT GTTGCCTTTA CCAATAAATA CCAGCATATT CCGGCTCGAT TTGCGGCTTT AAAAGGGACT GAGTATCAAG CATCTCCAGC GTTTATGGCG GGTAAAAAAG TGGGTGTACA GCGTGCAACT TCGATGGATC TTTATATTTC TGATAACTAC CCGGAAGCTG AAATCAAACG TTATGGCTCT GCCGATGAAG CCTATCTGGA TCTTAAAGCA GGTCGCCTAG ACTATATAAT GGCCGACTCA GCGGCAATTA CCGGTGGCTT ATTAGAAAAA GAAGGCGGTG ATAAATTTGA ACTTGTGGGT CCTAAACTAA ACGATCCTAA ATGGTTTGGT GAAGGTGCTG GTATTGCCGT GCGTCAACAA GATAAAGATC TTGTTGACCA ATTTAATGCT GCTATTAAAG CGATTCGTGC CGATGGGACT TATCAAACAA TTCAAGATAA ATACTTTACC TTTGATGTTT ATGGTAGTGA AGAATAA
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Protein sequence | MKKMSMLIAL FTLSVNVAQA KQWTQIRIGV EGAYPPFSQT EADGSVTGFD IDIANALCAE MKADCTLIKQ DWDGIIPALM ARKFDAIVAT MDITEERKKR VAFTNKYQHI PARFAALKGT EYQASPAFMA GKKVGVQRAT SMDLYISDNY PEAEIKRYGS ADEAYLDLKA GRLDYIMADS AAITGGLLEK EGGDKFELVG PKLNDPKWFG EGAGIAVRQQ DKDLVDQFNA AIKAIRADGT YQTIQDKYFT FDVYGSEE
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