| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A2417 |
|---|
| Symbol | |
|---|
| ID | 4681253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 2414083 |
|---|
| End bp | 2414877 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639846678 |
|---|
| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
|---|
| Protein accession | YP_993723 |
|---|
| Protein GI | 121600313 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.131702 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTGA ACTGGCGGAA GATGGCCGCG CACGCGGTGG TGACGGCCAC GGCCCTGGCG
GCGGGCAGCG CGTTCGCCGC CGACCTGAAG GAAATCCGCT TCGGCGTCGA GGCGTCGTAT
GCGCCGTTCG AGTACAAGAC GCCGGACGGC AAGCTGGCGG GCTTCGACAT CGACATCGGC
AACGCGGTGT GCGCGAAGCT GAAGGTCAAG TGCGTGTGGG TCGAGAACGC GTTCGACGGC
CTGATCCCGG CGCTGCAGGC GCGCAAGTTC GACGCGATCA ACTCCGACAT GACGATCACC
GAGCAACGTC GGAAGGCAAT CGATTTCACC GACCCGATCT ACACGATCCC GAACCAGCTG
ATCGCGAAGA AGGGCAGCGG CCTGCTGCCG ACCACCGCGT CGCTGAAGGG CAAGCGCATC
GGCGTGCTGC AGGGCACGAT CCAGGAAGCG TACGCGAAGA AGCGCTGGGC GCCGGCGGGC
GTCGAAGTCG TGCCGTACCA GACGCAGGAT CTCGCCTACG AAGACCTGAA GTCGGGCCGT
CTCGACGCGA CCTTCCAGGA TTCGGAGGCC GGCGCGAAGG GCTTCCTGTC GAAGCCGCAG
GGCGCGGGTT TCGCGTTCGC GGGCGACCAC GTGAGCGACG CCGAGATCCT CGGCACGGGC
GTGGGCTTCG GCATGCGCAA GAACGACGCG CAGCTGAAGA GCGCAGTCAA TCAGGCGCTC
AAGGAACTGA AAGCCGACGG CACGATCGAC GGCCTCGCGA AGAAGTATTT CAGCGTGCCC
GTGACGCTGA AGTAA
|
|---|
| Protein sequence | MKLNWRKMAA HAVVTATALA AGSAFAADLK EIRFGVEASY APFEYKTPDG KLAGFDIDIG
NAVCAKLKVK CVWVENAFDG LIPALQARKF DAINSDMTIT EQRRKAIDFT DPIYTIPNQL
IAKKGSGLLP TTASLKGKRI GVLQGTIQEA YAKKRWAPAG VEVVPYQTQD LAYEDLKSGR
LDATFQDSEA GAKGFLSKPQ GAGFAFAGDH VSDAEILGTG VGFGMRKNDA QLKSAVNQAL
KELKADGTID GLAKKYFSVP VTLK
|
|---|
| |