Gene SeD_A0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0994 
SymbolartI 
ID6871358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp984427 
End bp985158 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content52% 
IMG OID642784179 
Productarginine ABC transporter periplasmic arginine-binding protein ArtI 
Protein accessionYP_002214854 
Protein GI198245831 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.633483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TTCTGATTGC CGCGCTAATT GCAGGCTTTA GCCTTTCCGC TACAGCAGCC 
CAGACCATTC GTTTTGCGAC CGAAGCGTCC TATCCGCCGT TCGAATCGAT GGATGCTAAT
AACAAGATTG TCGGCTTTGA CGTCGACCTG GCCAACGCGC TATGTAAAGA GATCGACGCC
TCCTGTACCT TTACCAATCA GGCGTTCGAC AGCCTGATCC CCAGCCTGAA ATTCCGCCGC
TTCGACGCTG TAATGGCGGG AATGGATATC ACGCCGGAAC GTGAAAAGCA GGTGCTGTTT
ACCACGCCAT ATTACGACAA CTCCGCGCTG TTCGTGGGTC AGCAGGGCAA ATACACCAGC
GTTGATCAAC TGAAAGGCAA GAAAGTCGGC GTACAGAACG GTACGACGCA CCAGAAATTC
ATCATGGATA AGCATCCGGA AATCACCACC GTACCGTATG ACAGCTATCA GAACGCGAAG
CTGGATCTAC AAAATGGCCG TATCGACGCT GTTTTCGGCG ACACGGCGGT CGTGACCGAA
TGGCTGAAAG CCAATCCTAA GCTGGCGCCG GTCGGCGATA AAGTCACCGA TAAAGATTAT
TTCGGCACCG GCCTGGGTAT CGCGGTACGT CAGGGCAACA CCGAGCTGCA GCAGAAATTC
AATACTGCGC TGGAAAAAGT GAAGAAAGAT GGGACTTACG AGACCATCTA TAACAAATGG
TTCCAGAAGT AA
 
Protein sequence
MKKVLIAALI AGFSLSATAA QTIRFATEAS YPPFESMDAN NKIVGFDVDL ANALCKEIDA 
SCTFTNQAFD SLIPSLKFRR FDAVMAGMDI TPEREKQVLF TTPYYDNSAL FVGQQGKYTS
VDQLKGKKVG VQNGTTHQKF IMDKHPEITT VPYDSYQNAK LDLQNGRIDA VFGDTAVVTE
WLKANPKLAP VGDKVTDKDY FGTGLGIAVR QGNTELQQKF NTALEKVKKD GTYETIYNKW
FQK