| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1701 |
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| Symbol | |
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| ID | 8132643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1960653 |
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| End bp | 1961384 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644864989 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_003017278 |
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| Protein GI | 253688088 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0117133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT TGATTGTTGC AGCCTTATTC GCAGTAGGCG CCGCCTCTGC TAACGCTGCG
GATACCATCC GTTTCGCGAC CGAAGCCTCC TACCCTCCGT TCGAATTTGT CGATGCCAAT
AACCAGATTC AAGGTTTTGA TATCGATCTG GCTAATGCCC TGTGCAAAGA AATGCAGGCA
AACTGCACGT TCAGCAATCA GGCTTTCGAC AGCCTGATCC CCGGTCTGAA ATTCCGTCGC
TTCGAAGCCG TCATCGCGGG AATGGATATT ACTCCAGAGC GTCAGCAACA GGTGTCATTC
ACTCAGCCTT ACTATGATAA CTCTGCTCAG TTTATTGCCC AGAAAGGGAA AGTGGCCGAT
GTCGCTGCAC TGACAGGCAA ACGCGTTGGC GTACAGAATG GTACGACCCA TCAGAAATAC
CTGATGGAAA AGCATAGCGA TATCAAAACT GTGCCTTACG ACAGCTACCA GAATGCCGTG
CTGGATCTGA AAAATGGCCG TCTGGATGCC GTGTTCGGTG ATACCGCAGT GGTTAACGAA
TGGCTGAAAC AGAACGATAC GCTGAGCACC GTGGGCCAGA AGGTGACGGA TAAAGGTTAC
TTCGGTATCG GTCTGGGCAT CGCCGTGCGC CAGAACAACG ATGAGCTGCT GAAAAAATTC
GACGATGCGC TCAACAAAAT CAAGCAGGAT GGCACTTACG AGACCATCTA CAAAAAATGG
TTCCAGCAGT AA
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| Protein sequence | MKKLIVAALF AVGAASANAA DTIRFATEAS YPPFEFVDAN NQIQGFDIDL ANALCKEMQA
NCTFSNQAFD SLIPGLKFRR FEAVIAGMDI TPERQQQVSF TQPYYDNSAQ FIAQKGKVAD
VAALTGKRVG VQNGTTHQKY LMEKHSDIKT VPYDSYQNAV LDLKNGRLDA VFGDTAVVNE
WLKQNDTLST VGQKVTDKGY FGIGLGIAVR QNNDELLKKF DDALNKIKQD GTYETIYKKW
FQQ
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