| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1588 |
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| Symbol | |
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| ID | 5322446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1686274 |
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| End bp | 1687056 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640790532 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001327264 |
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| Protein GI | 150396797 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTATTT CCAAACGGCT TGCGGCCACC GCATCGGCTG CCGTTTTCGT GCTTATGACC
GGCATCGCCA TGGCGGACGG CGAGAAGGTG GTAATCGGCA GCGAAGGCGC TTATCCGCCC
TTCAACAATC TCGAATCCGA CGGCACGCTG ACCGGCTTCG ACATCGACAT CGCCAAGGCG
CTTTGCGAAG AGATGAAAGC GGACTGTACT TTCGTCACAC AGGAATGGGA CGGAATGATT
CCGGCGCTGA TCGCCAAGAA ATTCGATGCG ATCGTCGCGT CGATGTCGAT CACGGAAGAG
CGCAAGCAAC AGGTCGACTT TACCAACAAA TACTACAACA CGCCGCCGGC AATCGTCGTG
CCGAAGGATT CACCGATTAC CGAGGCAACC GCGGCCGGCC TTTCCGGCAA GGTGCTGGGC
GCGCAAAGCT CCACCACCCA TTCCAACTAT GCGGAAGCGC ATATGAAGGA GTCTGAGCTG
AAGCTCTATC CAACCGCGGA TGAATACAAG CTCGATCTTG CCAACGGCCG CATCGACGCG
GCGATCGACG ACGTCGTCGT GCTTTCGGAA TGGCTGAAGA CCGAGGACGG CGCCTGCTGC
AAGCTGCTCG GCACCCTGCC CATCGATCCC GTCATCAATG GCGAGGGCGC CGGCATCGCA
GTGCGCAAAG GCGATGACGC GCTGCGCGAA AAGCTCAACA AGGCCATCGA GGCCATCCGC
GCGAATGGCA AGTACAAGCA AATCAACGAA AAGTACTTCC CCTTCGACGT CTACGGTAGC
TAA
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| Protein sequence | MLISKRLAAT ASAAVFVLMT GIAMADGEKV VIGSEGAYPP FNNLESDGTL TGFDIDIAKA
LCEEMKADCT FVTQEWDGMI PALIAKKFDA IVASMSITEE RKQQVDFTNK YYNTPPAIVV
PKDSPITEAT AAGLSGKVLG AQSSTTHSNY AEAHMKESEL KLYPTADEYK LDLANGRIDA
AIDDVVVLSE WLKTEDGACC KLLGTLPIDP VINGEGAGIA VRKGDDALRE KLNKAIEAIR
ANGKYKQINE KYFPFDVYGS
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