| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6020 |
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| Symbol | |
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| ID | 6181837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 576946 |
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| End bp | 577740 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689150 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001816009 |
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| Protein GI | 172065297 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGT GGATGGCGGC GCTCGCGGTT GCGCTGACGG CGACGACGAT CGCGGGGGCC
GCGCAGGCGG GCGACTGGAC GGGCAAGGAG ATCCGCCTCG CGGTCGATCC GACCTACCCG
CCGCTCGAAT ACAAGCTGCC AGACGGCACG CTGACCGGGT TCGGGATCGA CATCACGAAT
GCGTTGTGCG CGGAGCTGCA TGCACGCTGC GTGTGGGTCG AGTCGAGTTT CGACGGGATG
ATTCCCGGGC TGCTCGCGCG CAAGTTCGAC GTGATCGCCT CGTCGATGAC GATCACGCCG
AAACGGATGC AGCAGATCGC GTTCACGAAC CGGATCTCGA ACGCGCCGGC GCGGCTGATC
GCGCGCAAGG GTTCGCCGCT GCTGCCGACG GCCGCGTCGC TGAAGGGCAA GCGGGTCGGC
GTCGAGCAGG GCTCCGCGCA GGCCGACTAT GCGGTCGCGA ACTGGCAGCC GGCCGGCGTG
CAGATCGAGT CGTACCAGAA CCAGGGCCAG GTGTACGCCG ATCTCGTGAC GGGGCGGCTC
GACGCGGCGT TCCAGGCGTC GATCGCGGCC AGCGACGGCT TCCTGAAGAA GCCGCAGGGC
AAGGACTTCA TGTTCGTCGG CGCGGCGATC GACGACGCGA AGTACTTCGG GCAGGGCGAC
GGCCTCGGGC TCCGCAAGCA GGACGCCGAC CTGCGCGACG CGTTCAACCG CGCGCTCGCG
ACGATCCTCG CGAACGGCAC GTATCAGAAG ATCAACAAGA AGTATTTCGA CTTCGACATC
TACGGCACGA AGTAA
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| Protein sequence | MKQWMAALAV ALTATTIAGA AQAGDWTGKE IRLAVDPTYP PLEYKLPDGT LTGFGIDITN
ALCAELHARC VWVESSFDGM IPGLLARKFD VIASSMTITP KRMQQIAFTN RISNAPARLI
ARKGSPLLPT AASLKGKRVG VEQGSAQADY AVANWQPAGV QIESYQNQGQ VYADLVTGRL
DAAFQASIAA SDGFLKKPQG KDFMFVGAAI DDAKYFGQGD GLGLRKQDAD LRDAFNRALA
TILANGTYQK INKKYFDFDI YGTK
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