More than 300 homologs were found in PanDaTox collection
for query gene LGAS_0728 on replicon NC_008530
Organism: Lactobacillus gasseri ATCC 33323



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008530  LGAS_0728  ABC-type oligopeptide transport system, periplasmic component  100 
 
 
591 aa  1216    Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal  0.414053 
 
 
-
 
NC_008530  LGAS_0778  ABC-type oligopeptide transport system, periplasmic component  55.27 
 
 
605 aa  653    Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000335108  hitchhiker  0.00000000000176984 
 
 
-
 
NC_008530  LGAS_1666  ABC-type oligopeptide transport system, periplasmic component  63.17 
 
 
467 aa  633  1e-180  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_0779  ABC-type oligopeptide transport system, periplasmic component  51.95 
 
 
590 aa  628  1e-178  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00616067  hitchhiker  0.000000000000014746 
 
 
-
 
NC_008528  OEOE_1615  ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic component  42.83 
 
 
596 aa  437  1e-121  Oenococcus oeni PSU-1  Bacteria  normal  0.176956  n/a   
 
 
-
 
NC_012793  GWCH70_1273  extracellular solute-binding protein family 5  39.37 
 
 
593 aa  407  1.0000000000000001e-112  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0724  oligopeptide ABC transporter, oligopeptide-binding protein  37.39 
 
 
593 aa  391  1e-107  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0713  oligopeptide ABC transporter, oligopeptide-binding protein  37.91 
 
 
593 aa  391  1e-107  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00303874 
 
 
-
 
NC_005945  BAS0623  oligopeptide ABC transporter oligopeptide-binding protein  37.91 
 
 
593 aa  391  1e-107  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0566  oligopeptide ABC transporter, oligopeptide-binding protein  37.56 
 
 
593 aa  391  1e-107  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0785  oligopeptide ABC transporter, oligopeptide-binding protein  37.56 
 
 
593 aa  390  1e-107  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0656  oligopeptide ABC transporter oligopeptide-binding protein  37.91 
 
 
593 aa  391  1e-107  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008506  LACR_D17  ABC-type oligopeptide transport system, periplasmic component  38.99 
 
 
600 aa  385  1e-105  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_2026  ABC-type oligopeptide transport system, periplasmic component  38.26 
 
 
600 aa  378  1e-103  Lactococcus lactis subsp. cremoris SK11  Bacteria  unclonable  0.00409621  n/a   
 
 
-
 
NC_009674  Bcer98_0551  extracellular solute-binding protein  36.55 
 
 
591 aa  379  1e-103  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0567  oligopeptide ABC transporter, oligopeptide-binding protein  34.29 
 
 
592 aa  368  1e-100  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0570  extracellular solute-binding protein  34.86 
 
 
591 aa  354  2e-96  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_1116  extracellular solute-binding protein family 5  30.19 
 
 
592 aa  265  3e-69  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013515  Smon_1115  extracellular solute-binding protein family 5  30.58 
 
 
596 aa  245  9.999999999999999e-64  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009632  SaurJH1_1009  extracellular solute-binding protein  30.54 
 
 
571 aa  215  1.9999999999999998e-54  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0990  extracellular solute-binding protein  30.54 
 
 
571 aa  215  1.9999999999999998e-54  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2798  extracellular solute-binding protein family 5  22.2 
 
 
557 aa  130  7.000000000000001e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2906  extracellular solute-binding protein family 5  23.79 
 
 
574 aa  111  3e-23  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_2258  solute-binding family 5 protein  22.07 
 
 
579 aa  108  2e-22  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2555  oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein  22.59 
 
 
580 aa  107  5e-22  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2657  extracellular solute-binding protein  23.33 
 
 
617 aa  103  9e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.0000297428  n/a   
 
 
-
 
NC_010718  Nther_0477  extracellular solute-binding protein family 5  20.34 
 
 
573 aa  100  8e-20  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_1596  extracellular solute-binding protein family 5  22.37 
 
 
572 aa  97.1  8e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0368881  unclonable  7.93881e-23 
 
 
-
 
NC_011726  PCC8801_0359  extracellular solute-binding protein family 5  22.55 
 
 
607 aa  94.4  5e-18  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0366  extracellular solute-binding protein family 5  22.55 
 
 
607 aa  93.6  9e-18  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_19910  ABC-type dipeptide transport system, periplasmic component  22.97 
 
 
589 aa  92.4  2e-17  Saccharomonospora viridis DSM 43017  Bacteria  hitchhiker  0.000984023  hitchhiker  0.000242655 
 
 
-
 
NC_010814  Glov_2097  4-phytase  23.21 
 
 
546 aa  92  3e-17  Geobacter lovleyi SZ  Bacteria  unclonable  0.00000775897  n/a   
 
 
-
 
NC_009720  Xaut_2761  extracellular solute-binding protein  26.7 
 
 
544 aa  91.7  4e-17  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5370  extracellular solute-binding protein family 5  23.53 
 
 
629 aa  91.7  4e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.358498 
 
 
-
 
NC_013205  Aaci_2261  extracellular solute-binding protein family 5  22.78 
 
 
579 aa  91.3  5e-17  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0252536  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0207  extracellular solute-binding protein  23.08 
 
 
567 aa  90.5  7e-17  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0265  oligopeptide-binding protein OppA  24.38 
 
 
566 aa  90.5  9e-17  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3973  extracellular solute-binding protein family 5  23.24 
 
 
549 aa  90.5  9e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0266  extracellular solute-binding protein family 5  25.13 
 
 
575 aa  89.4  2e-16  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1768  extracellular solute-binding protein family 5  24.16 
 
 
579 aa  89.4  2e-16  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000449992  n/a   
 
 
-
 
NC_007947  Mfla_1483  extracellular solute-binding protein  21.42 
 
 
551 aa  89.4  2e-16  Methylobacillus flagellatus KT  Bacteria  normal  0.228319  normal  0.152124 
 
 
-
 
NC_008554  Sfum_1411  extracellular solute-binding protein  21.34 
 
 
559 aa  89  2e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0247  oligopeptide ABC transporter, substrate-binding protein, putative  24.1 
 
 
567 aa  88.6  3e-16  Bacillus cereus ATCC 10987  Bacteria  normal  0.460021  n/a   
 
 
-
 
NC_011769  DvMF_0788  extracellular solute-binding protein family 5  22.98 
 
 
576 aa  88.2  3e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.301156 
 
 
-
 
NC_009485  BBta_1982  putative ABC transporter, periplasmic binding protein  22.63 
 
 
524 aa  87.8  5e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0990283  normal 
 
 
-
 
NC_011981  Avi_7181  ABC transporter substrate binding protein (oligopeptide)  23.69 
 
 
542 aa  87  8e-16  Agrobacterium vitis S4  Bacteria  normal  0.219647  n/a   
 
 
-
 
NC_002967  TDE1273  oligopeptide/dipeptide ABC transporter, peptide-binding protein  21.18 
 
 
531 aa  86.3  0.000000000000001  Treponema denticola ATCC 35405  Bacteria  normal  0.0104885  n/a   
 
 
-
 
NC_011831  Cagg_1897  extracellular solute-binding protein family 5  22.9 
 
 
554 aa  87  0.000000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0504  ABC transporter substrate-binding protein  27.48 
 
 
531 aa  86.7  0.000000000000001  Brucella ovis ATCC 25840  Bacteria  normal  0.325614  n/a   
 
 
-
 
NC_009832  Spro_2857  extracellular solute-binding protein  26.99 
 
 
593 aa  86.3  0.000000000000002  Serratia proteamaculans 568  Bacteria  normal  normal  0.358002 
 
 
-
 
NC_011126  HY04AAS1_1182  extracellular solute-binding protein family 5  23.63 
 
 
581 aa  85.1  0.000000000000003  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4390  solute-binding family 5 protein  23.27 
 
 
521 aa  85.1  0.000000000000003  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4231  oligopeptide ABC transporter, oligopeptide-binding protein  23.27 
 
 
521 aa  85.1  0.000000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4729  solute-binding family 5 protein  23.27 
 
 
521 aa  85.1  0.000000000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4608  extracellular solute-binding protein  23.27 
 
 
521 aa  85.1  0.000000000000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_1832  extracellular solute-binding protein family 5  22.29 
 
 
587 aa  85.5  0.000000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  0.315611  normal 
 
 
-
 
NC_006274  BCZK4243  solute-binding family 5 protein  23.06 
 
 
521 aa  85.1  0.000000000000004  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1169  oligopeptide-binding protein of oligopeptide ABC transporter  24.38 
 
 
587 aa  84.3  0.000000000000006  Synechococcus elongatus PCC 7942  Bacteria  normal  0.317639  normal 
 
 
-
 
NC_007953  Bxe_C0146  peptide/opine/nickel ABC transporter periplasmic ligand-binding protein  24.33 
 
 
539 aa  84.3  0.000000000000006  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.29775 
 
 
-
 
NC_010730  SYO3AOP1_0639  extracellular solute-binding protein family 5  26.02 
 
 
580 aa  82.8  0.00000000000001  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.000000307469  n/a   
 
 
-
 
NC_009485  BBta_4859  putative ABC transporter, substrate-binding protein  21.16 
 
 
532 aa  83.2  0.00000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.176928  normal  0.590645 
 
 
-
 
NC_011004  Rpal_1632  extracellular solute-binding protein family 5  25.95 
 
 
517 aa  83.2  0.00000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3787  extracellular solute-binding protein  26.82 
 
 
531 aa  83.2  0.00000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.216169  n/a   
 
 
-
 
NC_008254  Meso_1699  extracellular solute-binding protein  23.5 
 
 
611 aa  83.6  0.00000000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0190  extracellular solute-binding protein  22.17 
 
 
533 aa  82.8  0.00000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2583  putative ABC transporter, substrate binding subunit  24.62 
 
 
524 aa  83.6  0.00000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0432339 
 
 
-
 
NC_013526  Tter_2073  extracellular solute-binding protein family 5  23.03 
 
 
627 aa  83.2  0.00000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0694715  n/a   
 
 
-
 
NC_009972  Haur_3501  extracellular solute-binding protein  23.29 
 
 
639 aa  82.4  0.00000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.0000268642  n/a   
 
 
-
 
NC_012880  Dd703_1807  extracellular solute-binding protein family 5  22.24 
 
 
528 aa  82  0.00000000000003  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2258  extracellular solute-binding protein family 5  23.69 
 
 
591 aa  81.3  0.00000000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  unclonable  0.000000752385  n/a   
 
 
-
 
NC_007778  RPB_0232  extracellular solute-binding protein  25.43 
 
 
517 aa  81.3  0.00000000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_2547  extracellular solute-binding protein  22.1 
 
 
534 aa  81.3  0.00000000000005  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.220611  normal 
 
 
-
 
NC_008751  Dvul_1145  extracellular solute-binding protein  21.4 
 
 
565 aa  81.3  0.00000000000005  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.00838015  normal  0.546746 
 
 
-
 
NC_009720  Xaut_2760  extracellular solute-binding protein  21.11 
 
 
544 aa  80.5  0.00000000000007  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0241  putative oligopeptide ABC transporter, oligopeptide-binding protein  21.48 
 
 
575 aa  80.9  0.00000000000007  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_012912  Dd1591_3603  extracellular solute-binding protein family 5  24.14 
 
 
542 aa  80.5  0.00000000000008  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0351  nickel ABC transporter, periplasmic nickel- binding protein  22.53 
 
 
532 aa  80.5  0.00000000000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0248  oligopeptide ABC transporter, oligopeptide-binding protein, putative  22.92 
 
 
575 aa  80.5  0.00000000000009  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0409  peptide ABC transporter, periplasmic peptide-binding protein  24.23 
 
 
527 aa  80.1  0.0000000000001  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0352  peptide ABC transporter, periplasmic peptide-binding protein  24.23 
 
 
527 aa  80.1  0.0000000000001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0009  extracellular solute-binding protein family 5  25.93 
 
 
544 aa  79.7  0.0000000000001  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.327799  n/a   
 
 
-
 
NC_013889  TK90_0599  extracellular solute-binding protein family 5  19.83 
 
 
619 aa  79.7  0.0000000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.300607 
 
 
-
 
NC_007952  Bxe_B1565  ABC peptide transporter, periplasmic ligand binding protein  21.39 
 
 
534 aa  79  0.0000000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008599  CFF8240_1652  peptide ABC transporter, periplasmic peptide-binding protein  22.51 
 
 
511 aa  79.7  0.0000000000002  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.2387  n/a   
 
 
-
 
NC_010501  PputW619_3005  nickel ABC transporter, periplasmic nickel-binding protein  22.13 
 
 
488 aa  78.2  0.0000000000003  Pseudomonas putida W619  Bacteria  normal  normal  0.441724 
 
 
-
 
NC_005945  BAS0218  oligopeptide ABC transporter oligopeptide-binding protein  22.56 
 
 
559 aa  78.6  0.0000000000003  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0231  oligopeptide ABC transporter oligopeptide-binding protein  22.56 
 
 
555 aa  78.6  0.0000000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0140  peptide/opine/nickel ABC transporter periplasmic ligand-binding protein  22.11 
 
 
534 aa  78.6  0.0000000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.259377  normal  0.633025 
 
 
-
 
NC_005957  BT9727_0205  oligopeptide ABC transporter, oligopeptide-binding protein  21.71 
 
 
575 aa  78.2  0.0000000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5662  extracellular solute-binding protein  24.73 
 
 
544 aa  78.2  0.0000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.76313 
 
 
-
 
NC_013947  Snas_3196  extracellular solute-binding protein family 5  21.63 
 
 
600 aa  78.2  0.0000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  hitchhiker  0.0000171923  unclonable  0.0000000000413572 
 
 
-
 
NC_011769  DvMF_2402  nickel ABC transporter, periplasmic nickel-binding protein  23.12 
 
 
538 aa  78.2  0.0000000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009674  Bcer98_0219  extracellular solute-binding protein  21.56 
 
 
575 aa  78.2  0.0000000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2203  extracellular solute-binding protein family 5  21.99 
 
 
531 aa  78.2  0.0000000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0247328 
 
 
-
 
NC_006274  BCZK0209  oligopeptide ABC transporter, oligopeptide-binding protein  22.82 
 
 
575 aa  77.8  0.0000000000005  Bacillus cereus E33L  Bacteria  normal  0.019765  n/a   
 
 
-
 
NC_008312  Tery_4719  extracellular solute-binding protein  24.71 
 
 
591 aa  77  0.0000000000008  Trichodesmium erythraeum IMS101  Bacteria  normal  0.42042  normal 
 
 
-
 
NC_002939  GSU1433  peptide ABC transporter, periplasmic peptide-binding protein  22.15 
 
 
538 aa  77  0.0000000000009  Geobacter sulfurreducens PCA  Bacteria  normal  0.948157  n/a   
 
 
-
 
NC_011729  PCC7424_0337  extracellular solute-binding protein family 5  23.37 
 
 
581 aa  77  0.0000000000009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_1649  extracellular solute-binding protein family 5  23.62 
 
 
584 aa  77  0.0000000000009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_2655  extracellular solute-binding protein  20.75 
 
 
539 aa  77  0.0000000000009  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.0000125789  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>