Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1649 |
Symbol | |
ID | 7108530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 1824973 |
End bp | 1826727 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643479914 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_002376955 |
Protein GI | 218438626 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTTC CCCAATTTTT CCAAAAAACA GTCAGTAAAT GGTTAATTTT AATTTTTGTG GCGGCGAGTT GTTTACCTCT AACCGCTTGC GCTCCTACGA CTGATAAAAA TCAAATTGTA CAAGCTGTTT TAAGCGATCC AAAAACCTTT AATGCGGTGC TTTCTCAAGA GTCTCCTAAT GTTTTTGGAT TATTATATGA AGGACTGATT ACAGAAAATC CCTGTACCGG AAAAAAAGAA CCGGCTTTAG CAGAATCTTG GAAAGTTTCT GATGATAAAT TAAAGATTAC ATTTACCCTC AGAGAAGATT TAAAATGGTC AGATGGGCAA CCTTTAACGG CTGATGATGT GGTATTTAGT TATAATCAAC TGTATTTAAA TCCCAAAATT CCTAATAATT ATCGAGATAG TATGCGAATT GGGAAAAGTG GGGAATTTCC GATTATTCGC AAACTCAACG ATCGTCAAGT AGAATTTATT ATTAAAGAAC CGTTTGCCCC ATTTTTTGAT CTAGCTGAAG TTCCCATTTT ACCCAAACAT ATTTTACAAG AAACTATAGA AAAAACTGAT GGACAAGGAA ATCCCATTTT TCTGACGACT TGGGGAGTTG ATACCCCTCC CGAAAAAATT GTGGTTAATG GGCCTTATCG CCTGAAAGAT TATTCTACCA GTCAACGTAT TAGATTTGAA AAAAATCCTT ATTATTGGAA AAAAGATTTA GAAGGAAACC CGTTACCTTA TATTGATGAA ATTGTCTGGG CTATTGTTGA ATCTCAAGAT ACATTTTTAT TACAATTTCG CTCAGGAAGT TTAGACTCTA TTGGGGTGTC TCCTGAATAT TTTTCTTTAC TGAAAAAAGA AGAAGATAAA AGTAATTTTA AAATTTATAA TGGGGGGCCG GCTTACGGAG TAAACTTTAT CGGGTTCAAT CTTAATAAAG GGAAACGAAA TGGTAAACCC TTAGTTGATC CAATTAGATC TAAATGGTTT AATAACGTTA ATTTTAGACG AGCAGTAGCT TATGCAATTG ATAGACCTCG AATGATTAAT AATATTTTTC GAGGTTTAGG AGAACCGCAA AAATCTCAAG TTTCGGTACA ATCTCCCTAT TATGATAAAA CGTTAGAAGG ATATGAATAT AATCCCGAAA AAGCGAAAGA GTTATTACTC AAAGAAGGAT TTAAATATGA TAGTCAAGGG AATCTTTTAG ATGCAGAAGG CAACCGAGTT AAATTTAGTT TAATTACCAA TGCAGGAAAT AAAACTAGGG AAGCAATGGG AGCGCAAATT AAACAAGATT TAGCTAAAAT TGGCATTCAG GTAGATTTCA GTCCCTTGGC GTTTAATGTA TTAGTGGATA AATTAAGCAA CTCTTTAGAA TGGGAAGCGC ATTTATTAGG ATTTACCGGA GGAAATGAAC CTCATGCGCC TAATCTTTGG TATACCGATG GCAATTTACA TACCTTTAAT CAACAACCTC AACCCGGAAC ACCTCCTATA GAAGGTCGAG AAATTGCAGA CTGGGAAAGG GAAATAGAAC GATTATATGT ACAGGGTTCA CAAGAATTAG ACCTGGAAAA ACGCAAGGCA ATTTATGCTC AAGCACAGCG TTTAGTGGAT GAATATTTAC CCTATATTTA TTTAGTTAAT CCCTATTCTA TGTCGGCAGT TCGTGAGCGC TTTGACAACA TTGATTATTG TGCTTTGGGA GGCGCTTTCT GGAATATTGA CGAAATCAAA ATTAGTGAGG AGTGA
|
Protein sequence | MKLPQFFQKT VSKWLILIFV AASCLPLTAC APTTDKNQIV QAVLSDPKTF NAVLSQESPN VFGLLYEGLI TENPCTGKKE PALAESWKVS DDKLKITFTL REDLKWSDGQ PLTADDVVFS YNQLYLNPKI PNNYRDSMRI GKSGEFPIIR KLNDRQVEFI IKEPFAPFFD LAEVPILPKH ILQETIEKTD GQGNPIFLTT WGVDTPPEKI VVNGPYRLKD YSTSQRIRFE KNPYYWKKDL EGNPLPYIDE IVWAIVESQD TFLLQFRSGS LDSIGVSPEY FSLLKKEEDK SNFKIYNGGP AYGVNFIGFN LNKGKRNGKP LVDPIRSKWF NNVNFRRAVA YAIDRPRMIN NIFRGLGEPQ KSQVSVQSPY YDKTLEGYEY NPEKAKELLL KEGFKYDSQG NLLDAEGNRV KFSLITNAGN KTREAMGAQI KQDLAKIGIQ VDFSPLAFNV LVDKLSNSLE WEAHLLGFTG GNEPHAPNLW YTDGNLHTFN QQPQPGTPPI EGREIADWER EIERLYVQGS QELDLEKRKA IYAQAQRLVD EYLPYIYLVN PYSMSAVRER FDNIDYCALG GAFWNIDEIK ISEE
|
| |