| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1169 |
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| Symbol | |
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| ID | 3775475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1202102 |
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| End bp | 1203865 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637799596 |
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| Product | oligopeptide-binding protein of oligopeptide ABC transporter |
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| Protein accession | YP_400186 |
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| Protein GI | 81299978 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.317639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTGGC GCTCTTGGTT CGTGATTAGC CTCCGCCGCT GGCTGGCTTT TTGTCTGGCG
GCTGTGCTGC TAGTGGCCTG TGGTCGTGCG AGTGCACCGC CCCGTCAGCA GCTGATCGCC
AGCGTACGTT TCGATCCCAA AACCTTCAAC TACGCCTTAA ACGAGGAATC GCCCAACGTT
TTTGGGCTGC TCTACGAAGG CCTTGTCCAC GTCAATGGCT TTGATGGCAG CCTAGAACCT
GGTCTGGCTG AGTCGTGGCA GATTAGCCCT GATCGCCTGC AGGTGATCTT TCAGTTGCGG
CCCGATCTGC GCTGGTCCGA TGGCCAGCCC TTGACGGCGG CAGACGTCGA CTTCACCTAC
AACCGCATCT ACTTCAATCC CAAGGTGCCA ACTGGCGCGC GGGATATTCT GCGGATCGAC
CAAGATTTAC CAACGGTTAG GGCCGCGGGC GATCGCCAGG TGATTGTCCA GACGCCCCGC
CCCTTTGCCC CGCTGCTGCG AAACATGGCA CTGCCGATTT TGCCCCAGCA TGCCCTTGCC
ACTTCGCTTG AGCAGACTGA TAGTCAGGGA AATCCGGCTT TTTTGAGCAC TTGGGGTACG
GAGACTGATC CAAAGCAAAT TATTGTCAAC GGCCCGTTTC GGTTACAGCG CTATCAACCG
GGCCAACGGA TTATTTTTGA ACGGAATCCC TACTTTTATC AGCGCGATCG CGATGGGAGT
CCGCTACCCA AAATCGATCG TCTCGTTTGG CAAATTGTCG AGAATTCCGA CACCCAATTG
CTACAGTTCC GCTCGGGCGA TTTAGATGTT TTAGAGCCGA TTCAGCCCGG TGATTTCTCG
CTCTTAAAAC GAGAAGAACA GCGTGGTAAT TTCACAATCT ATAGTGGTGG CCCTGAACCG
CTGACCGTTT ATCTAACCTT TAATCTCAAC CAAGGGCGGC GCAAGGGTAA ACCTCTTGTC
GATCCGATCA AATCAGCTTG GTTTAATGAT GTTCGTTTCC GCCAAGCGAT CGCCTACGCC
ATCGATCGCC CCGCGATCGT CGATACGGCT TATCGCGGCT TAGGTGTAGT TGTCAACTCA
TTGATCATTC CCCAGAGTCC CTTTTATCTC AGCCCCGAGG AGGGATTACC GGTCTATAAC
TTCAATCAGC AAAAGGCGGA AGCACTGCTG AAAGAGGCAG GATTTCAAAC AGATGCGGAT
GGTCAACTGC GCGATCGCCA GGGCAATCCT GTTCGCTTCA CCGTCATCAC CAATGCTGAG
AATCCTGTAC GTGTCGCCAT GGGTGCCCGG ATTAAGGGCG ATCTGGCCCG TCTGGGGATT
CAGGTCGACT TTACGCCGAT CGCTTTTAGT AGTGTGATCG ATCGCCTGAG TAATCAGTTG
GATTGGGAAG GTTTGATTCT TGGACTGACC AGCAACATTG AACCTAACAG TGGTGCGAAT
GTATGGAATC CTCAAGGCAG TTTACACCTG TTTAATCAGC AGCCCAGTGA GAGCCAAGCA
CCCATTGAGG GTCAACAAGT TGCCCCTTGG GAAGCTGAAA TCTATCGCTT ATTTGTTGCT
GCGGCCCAGG AACTGAATGA CGATCGCCGC AAGGAAATCT ATGGTCAAGC TCAGCGTCTT
GCCCAGCAAT ATTTACCTTT TATCTATCTG GTCAATCGCC AACAAATTGC CGCTGTCCGC
AACACAGTCA CCCCTATTCA GTTCTCAGAG TTGGGCGGTG CGCTTTGGAA TACAGAATTC
GTATCGGTAA GTGCTGATGA TTGA
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| Protein sequence | MPWRSWFVIS LRRWLAFCLA AVLLVACGRA SAPPRQQLIA SVRFDPKTFN YALNEESPNV
FGLLYEGLVH VNGFDGSLEP GLAESWQISP DRLQVIFQLR PDLRWSDGQP LTAADVDFTY
NRIYFNPKVP TGARDILRID QDLPTVRAAG DRQVIVQTPR PFAPLLRNMA LPILPQHALA
TSLEQTDSQG NPAFLSTWGT ETDPKQIIVN GPFRLQRYQP GQRIIFERNP YFYQRDRDGS
PLPKIDRLVW QIVENSDTQL LQFRSGDLDV LEPIQPGDFS LLKREEQRGN FTIYSGGPEP
LTVYLTFNLN QGRRKGKPLV DPIKSAWFND VRFRQAIAYA IDRPAIVDTA YRGLGVVVNS
LIIPQSPFYL SPEEGLPVYN FNQQKAEALL KEAGFQTDAD GQLRDRQGNP VRFTVITNAE
NPVRVAMGAR IKGDLARLGI QVDFTPIAFS SVIDRLSNQL DWEGLILGLT SNIEPNSGAN
VWNPQGSLHL FNQQPSESQA PIEGQQVAPW EAEIYRLFVA AAQELNDDRR KEIYGQAQRL
AQQYLPFIYL VNRQQIAAVR NTVTPIQFSE LGGALWNTEF VSVSADD
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