| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0728 |
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| Symbol | |
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| ID | 4440081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 709796 |
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| End bp | 711571 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672585 |
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| Product | ABC-type oligopeptide transport system, periplasmic component |
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| Protein accession | YP_814557 |
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| Protein GI | 116629385 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.414053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGAAAG GAGAATTTTA TATGAAGATG TCAAAGTCCA AACTGCTGTA TGTAACACTA
GCGAGCTCAC TAGCGATTTT ATCAACTGCT TGTGGTGCTA AGAAAACTGA TTCGAGTAAT
CAACCCATCA AGTTTTCTCA GGCTGTTCCC CATAAACCCA TTAAAAAGGG AGGAACCTTA
ACCTATGCTT TAGAAAATGA ATCACCATTT ACTGGAATTT TTTCAGCTGA AATTGCTGAT
ACTAGTCCCG ATTCTGAAGC AGCTGCTCCA GGAGATGAAG CGCTTTTTGA TATTAATGAT
CATTATCAAT TTACCAATAA GGGTGCTGCT AGTTTAAAGT TAAATCATAG TAACAATACT
GCTGAAATCA AAGTAAAAAA GAAGGTTCGT TGGTCTGATG GAAAACCAGT AACAGCCAAG
GATTTAGAGT ATGCATACGA AATTTTAGCT AATCCTAAAG TTCAAACTAC TCAATATACT
TCTTCGCTTG AAAATATTAA GGGAATGGCT GAATACCATC GGGGAAAAGC CAACAATATT
TCAGGTCTTG AAATGCCAGA CGGACCAAAT GGAAAAACAT TAATTCTTCA CTTTAAGGAA
TTAAAACCAG CAATGATGAA CTCAGCTAAT GGTTTTTTCT GGGAACATGC TGCTCCTTAC
CATTATTTGA AAAGCGTTCC CTTTGAAAAA CTTGTTTCTA GTCCGCAAAT AAGAAAGCAC
CCACTCTACT TTGGTCCATA TAAAATGGAC AAAACTGTAC AAGGCCAATC TACTAGTTGG
TCAAGAAATC CATATTACTG GCGCGGTAAA CCTAATTTTG AACATATTTA CATGTCAAAT
ATTACTAATT CTAATGTTTC ACAAGCAATT AAGAGCAAAA AATTCGACGT TGCAAATGTT
CTTAGCTCGC AATGGGAACA GGTAAAAAAT ACTAAAGGCG TCAATTTTGT CGGCAAAAAA
ACACTTAGTT ACGACTACTT AGCCTTTAAG GTCGGAAAAT GGGATGCAAA ACTTGGTAAA
AACGTTGAAA ATCCTCATGC TAAGATGAAT AATCCTGCTT TACGAAAAGC AATGGCTTAT
GCAATGAATG TTGATGTCAT TAATAAACGT TTCTACCATG GTTTAGAATT CAGGATTAAT
TCTTTGATTC CTTCACAATT TACTCCATAT TATGATAAAA ATATTCCTGT CTATTCTTAT
AATCTAGATA AAGCCAATAA ACTACTAGAT AAAGCGGGCT ATAAAAAAGC TCCTGGTGCA
CTCTATCGAA GTCAGCCAAA TGGTAAACCA TTAGTTATCA ATCTAGCAGT ACGTGGTTCT
GGTGAAAATA GCGAAGCTAT CTGGCGTAAC TACATTCAAC AATGGAAAAA AGCCGGCTTA
AACGTTAAGT TCCTAGGCGG GCGGCCAATG GAATTTAATC GCTGGGTAGC AGCTGTTAAA
GCCAGTGATC CTAAGATTGA TGTTCTTGAA GGAGCTTGGG GCGCAGCAGG TGATCCTTCT
CCAAGCGTCT TTTATGGTGA AAAAATGCCT TATAATTTTG CCCGTTTTGT TTCTCCGACA
AACACTAAAT TATTGAATGA AATCGATTCT GCCAAATCTT TTGATAAAAA ATATCGGGTG
CAAAAATTTC ATGAATGGCA AAAATGGATG TACAACAAAG CGTATGTAGT CCCAACTAGT
GGTGCCTATT CAGTAACAGC TGTAAATAGT AAAGTCTCTG GTTGGTCATT AAAACCTTCT
GCTAATGTTT GGTATGAAGC GGGCTTTACT AAATAA
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| Protein sequence | MTKGEFYMKM SKSKLLYVTL ASSLAILSTA CGAKKTDSSN QPIKFSQAVP HKPIKKGGTL
TYALENESPF TGIFSAEIAD TSPDSEAAAP GDEALFDIND HYQFTNKGAA SLKLNHSNNT
AEIKVKKKVR WSDGKPVTAK DLEYAYEILA NPKVQTTQYT SSLENIKGMA EYHRGKANNI
SGLEMPDGPN GKTLILHFKE LKPAMMNSAN GFFWEHAAPY HYLKSVPFEK LVSSPQIRKH
PLYFGPYKMD KTVQGQSTSW SRNPYYWRGK PNFEHIYMSN ITNSNVSQAI KSKKFDVANV
LSSQWEQVKN TKGVNFVGKK TLSYDYLAFK VGKWDAKLGK NVENPHAKMN NPALRKAMAY
AMNVDVINKR FYHGLEFRIN SLIPSQFTPY YDKNIPVYSY NLDKANKLLD KAGYKKAPGA
LYRSQPNGKP LVINLAVRGS GENSEAIWRN YIQQWKKAGL NVKFLGGRPM EFNRWVAAVK
ASDPKIDVLE GAWGAAGDPS PSVFYGEKMP YNFARFVSPT NTKLLNEIDS AKSFDKKYRV
QKFHEWQKWM YNKAYVVPTS GAYSVTAVNS KVSGWSLKPS ANVWYEAGFT K
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