| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3973 |
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| Symbol | |
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| ID | 7260993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4224257 |
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| End bp | 4225906 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643563894 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002460422 |
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| Protein GI | 219669987 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGA AAAGATGGTT GGCGGTTGTA TTGTCTGGGG TTCTGGTGTT TTCACTGGCT
GCTTGTTCTC AGAGCGTTAA CAATCAAGGA GGCGCACAGA CTTCCGGCTC AGGGGAGCAG
ACCGTTCATT TGAATCTGCC TGAAAGCTGG GGCTTTGAGT CGTTTTATCC CGTCATTACG
CCGGCTAATT CATCAAGCGG CTATGGGATC ACCTACTATT TGACCAGTTT CTACGATACC
CTGGTCACTT ACGATGAAAA GGGTGAGTTA GCCGGGCTGC TGGCGGAGGA ATGGTCTGTG
AGCACCGACG GCAAGGTCTA TACCTTTAAA ATCAGGGAAG GGGTGAAATT CTCCGACGGA
ACCCCGCTGA CCGCAGAGGA TGTGGCTCAA TCCCTGCTGG CAGTTCCGGT CAATCTGGGC
CAATATAACG GCAGCTACGG CAAGCTTTCC ACCATCATCG CCGATGCGGT GGCCAAGGAT
GATCATACGG TGGAATTATA CCTGACTCAG CCCTATTACA GCACCTTGCG GGATTTGTGC
CTTGCCAACC CCTTTGCCAT CGTGTCCGGT GAGCAGCTCA ACGAGGATCT GACGGCAAAA
ACAAGCTTCA ATACCATAAG TTATGGAACG GGGCCTTATA TGTACGGGGG TGACGGAGAC
GGCAAAAGTT ATACCTTTGT GAGAAATCCC CATTACTGGG GAGAGCAGCC GGATGTGGAC
AGTTTCACCA TCAAGGTGAT CGCTGATAAT GACGCCAAGG TGCTTGCCCT TAAAAATGGC
GAACTGGACT TTATGTCGGG TATTGCCAAA ATATCCTCGG AAAGTTATCA GGAAATGAAA
AACACCAAGG GCTTTGGCGC GGCGGTGGAT AAGGCCCCCA TGCAGACCTA TTATCTGGGC
TATAATCTGA AGAATCCCCT GTTTGCGGAA AAAGTGGTCA GGGAAGCCAT GGCAGCCGCT
ATTGACAAAG GGAATATAGT GGACGGGATT TTCGGCGGAA TTCATGAGCA GGCGGATACC
TTTTTTGCCA AATCCCTGCC CTATTGCGAT ATGGAGCAAA CCACCTATGA GTTTGACCTG
GCAAAAGCCA ACCGTTTGCT GGATGATGCC GGCTATGTGG ATAGGGACGG GGACGGTATC
CGCGAGATCA ACGGAACCAG ACTGGCCGCT GATTTTGTCT ATCAGACCGA ATCCGTAGCC
AACAATGATA TGGTGGTTTA TATCTGCGAT CAGCTGAAAA AGATTGGCAT TGAATTGACC
CCGAAATCGG CGCCCATGAT GGAGTGGTAT GCCATGATTA CCGGAGGGCA GTACGGAGTG
ACTGTTTTCA AAACCCAGGG AGGCTATTAT GATCCGGCCA ATATTATCAG CGCTATGAAT
CCAAGCCAGT CCATGGACCC CATCATCATG CAGGCCGGTG AGTTTTTGCC GGATGGCGTG
GGTCTGATCA ATGAAGTGAA TTCAACAACG GATGAGGCCA GAATCCAGGA GATTTATACC
ATCATTTTAA ACACCATCGC GGATAATTGC CTCATGACTC CTCTTTATTA CACCCATCAA
GTCGCCTTGT ATAATGATAA AGTTGCCGGC TACAATTTCC CGGCCGATGC CGGCTTCACC
TCCATTCAGA ATATAAAGGC AGCCAAGTGA
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| Protein sequence | MKMKRWLAVV LSGVLVFSLA ACSQSVNNQG GAQTSGSGEQ TVHLNLPESW GFESFYPVIT
PANSSSGYGI TYYLTSFYDT LVTYDEKGEL AGLLAEEWSV STDGKVYTFK IREGVKFSDG
TPLTAEDVAQ SLLAVPVNLG QYNGSYGKLS TIIADAVAKD DHTVELYLTQ PYYSTLRDLC
LANPFAIVSG EQLNEDLTAK TSFNTISYGT GPYMYGGDGD GKSYTFVRNP HYWGEQPDVD
SFTIKVIADN DAKVLALKNG ELDFMSGIAK ISSESYQEMK NTKGFGAAVD KAPMQTYYLG
YNLKNPLFAE KVVREAMAAA IDKGNIVDGI FGGIHEQADT FFAKSLPYCD MEQTTYEFDL
AKANRLLDDA GYVDRDGDGI REINGTRLAA DFVYQTESVA NNDMVVYICD QLKKIGIELT
PKSAPMMEWY AMITGGQYGV TVFKTQGGYY DPANIISAMN PSQSMDPIIM QAGEFLPDGV
GLINEVNSTT DEARIQEIYT IILNTIADNC LMTPLYYTHQ VALYNDKVAG YNFPADAGFT
SIQNIKAAK
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