| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5370 |
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| Symbol | |
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| ID | 8336724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6191694 |
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| End bp | 6193583 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644958468 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003116070 |
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| Protein GI | 256394506 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.358498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACC CCAACCCACG ACGACGTGCT TTCGCCCTGG CGGCGGCCCT GGCCGGGGCG
GTGGCGCTGA GCGCGCCGGC CGCGGCCGCA TCCGGGCCGG CGCAGGCGCG GGCGCGCAGC
TCTTTTAGCC AGACCTCTGA CGCTCAGGCG GCGCCGGCTT CGGCGGCTGC CAGCGGCAAG
ACCTTGACCG TGGCGACCAC CGGCAGCATC GACTCCCTGT CGCCGTTCCT GGCGCAGCGG
GCGCTGCCCA CCCAGATCCA CCGCCTGATC TACGACTTCC TGACGAACTA CGACGCCTCC
GACGACCACG CGATCGGCGC CCTGGCCACC TCCTGGACCA CCTCGACGGA CAAGCTGACC
TGGACCTTCA CCTTCCGCGA CGGAATGAAG TGGTCCGACG GCCAGCCGGT CACCGCCGCC
GACGCGGCCT TCACCTACAA CCTGATGATG ACCAACGACG ACGCGGCCAC CGCGAACGGC
AACTTCGTCA CCAACTTCGC CAAGGTCACC GCGACCGGCA ACCAGCTGGT CATCACCTTG
AAGCAGCCGC AGTCCACGAT GCTCGCGCTG GACATCCCGA TCGTGCCGCA GCACGTCTGG
GCCTCGCACG TCGCCGACAT CGCCACGTTC AACAACGACG CCCAGTTCCC GGTCGTGGGC
GACGGGCCGT TCATCCTCAC CGGCTACCAG AAGGACCAGT ACCTCACCCT GGACGCCAAC
CCGAACTACT GGCGCGGCAA GCCCGGCTTC GACCACCTGG TGTTCAAGTT CTTCAAGGAC
GCCGACGCCG AGGTGGAGGC GCTGAAGAAG GGCGAGGTCG ACTTCGTCAG CGGCCTGACC
CCGGCGCAGT ACGACGCGCT GAAGGGCCAG TCGGGCATCG CCACCAACAA CGCGCAGGGC
AAGCGGTTCT ACGCCCTGGC GATGAACCCC GGCGCGACCA CCACCACCGG GCAGGCGTTC
GGCGACGGCA GCCCGGCGCT GCAGAACCAG CAGTTCCGCC AGGCGCTGAT GTACGCGATC
GACACCAAGA CGCTGGTCGC CAAGACCCTC GGCGGCTACG GCACGGTCGG CAGCGGCTAC
ATCGCCCCGA TCTTCGCCGC CTACCACTGG GCTCCGGACC CGGCCACCGC CTACACCTAC
GACCCGGCCA AGGCGAACCA GATGCTGGAC GCCGCCGGGT TCAAGAAGGG CTCGGACGGC
ATGCGCACGC TGCCCGACGG CAAGCCGCTG AAGCTGCGCC TGATGGGCGA GACCAACCGG
GCCGACGACA CCCAGAACGT CGCCTACGTC GCCGACTGGC TCAAGGCCGT CGGGATCGCC
ACCACCACCA CGGTCGTGGA CCAGGGCAAG CTCGCCGACA CCGAGACCGC CGGCACGTTC
GACCTGGCCT TCGACAGCTG GGGGGAGAAC CCGGACCCGG ACGCCGTGCT GTCGATCCAG
AAGTGCGACG GCCGGCCCGC CGCGCAGGGC AAGAACTTCA ACGGCGACGA CTTCATCTGC
GACCAGGACT ACGACGCCCT GTACCAGAAG CAGATCACCG AGTACGACCC GGCCGCGCGC
GCCGCCGACG TCAAGCAGAT GGAGCAGAAG CTCTACACCG ACGCCTACAT CAACGTCCTG
TATTACGGGA ACGTGCTGGA GGCCTACCGC TCCGACGTCA TCGGCTCCAT GGACAAGCAG
CCGCAGCCCA ACGGCCTGTA CTGGGGTCAG GACGGCTACT GGTCCCTGTG GTCGGCCAAG
CCCGTGGCCG CCTCCTCCTC GTCGTCCTCG TCGAGCTCGA ACACCGGTCT GATAGTCGGC
ATCGTGATCG CGATCGTGGT GGTCGGCGGC GGCGGTGCCC TGCTCCTGAC CCGCCGGCGC
CGCGGCACCA CCGCCGACGA ACGCGAGTAG
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| Protein sequence | MPNPNPRRRA FALAAALAGA VALSAPAAAA SGPAQARARS SFSQTSDAQA APASAAASGK
TLTVATTGSI DSLSPFLAQR ALPTQIHRLI YDFLTNYDAS DDHAIGALAT SWTTSTDKLT
WTFTFRDGMK WSDGQPVTAA DAAFTYNLMM TNDDAATANG NFVTNFAKVT ATGNQLVITL
KQPQSTMLAL DIPIVPQHVW ASHVADIATF NNDAQFPVVG DGPFILTGYQ KDQYLTLDAN
PNYWRGKPGF DHLVFKFFKD ADAEVEALKK GEVDFVSGLT PAQYDALKGQ SGIATNNAQG
KRFYALAMNP GATTTTGQAF GDGSPALQNQ QFRQALMYAI DTKTLVAKTL GGYGTVGSGY
IAPIFAAYHW APDPATAYTY DPAKANQMLD AAGFKKGSDG MRTLPDGKPL KLRLMGETNR
ADDTQNVAYV ADWLKAVGIA TTTTVVDQGK LADTETAGTF DLAFDSWGEN PDPDAVLSIQ
KCDGRPAAQG KNFNGDDFIC DQDYDALYQK QITEYDPAAR AADVKQMEQK LYTDAYINVL
YYGNVLEAYR SDVIGSMDKQ PQPNGLYWGQ DGYWSLWSAK PVAASSSSSS SSSNTGLIVG
IVIAIVVVGG GGALLLTRRR RGTTADERE
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