| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0205 |
|---|
| Symbol | oppA |
|---|
| ID | 2855126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 224763 |
|---|
| End bp | 226490 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637511586 |
|---|
| Product | oligopeptide ABC transporter, oligopeptide-binding protein |
|---|
| Protein accession | YP_034560 |
|---|
| Protein GI | 49479154 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA AGACAAAAAA ATGGGCTGGT GTATTTTCAG TATTACTGGG TAGTTCGCTT
GTGTTATCTG CTTGTGGGGG ACAGGAGGAT ACGGCTTCTA CAGAATCGGT TAAACAGCAA
GATTTAAAAA ACATAAAAAT TGAAAAGATC GCTGCGACAG ATAAAACGAA AGTGCCAGAT
AAAGCCAAGA ATAGAAAAGA TACGTTAGTA GTTGGGATTA ACAAACCAGG CGGCGTATTT
TTACCATATT TCCAACAAAA TGGTTGGGAC GGAAACGTAA CTTCAGTTAT TTTTGCATCT
CTCATATCAA CCGATAAACA AGGGAAACCA ATTCCAGAAT TAGCTGAGAA TTGGGACGTT
TCTTCTGATC AGTTAACCTA TACATTCCAT TTACGTAAAG ATTTGAAATT TAGCGATGGC
TCGCCATTAA CAGCGGATGA TGTAGCGTTC ACATTGACGC TTTTACACGA TAAGGCATAT
GAAGGCGAAG TGGACATCTC TCAATATGCA GTTAAAGGTG GTAAAGAATA TAAAGAAGGA
AAAGCAACTT CAATTGAAGG TATTCAAGTT ATCGATCCAC AGACAATAAA AATTACGACT
GAAAAGGTTA ATTCACAAGC TATATTTGTT TTTGGTAACG CAGTACTATC AAAAGCTTAT
TACGGAAAAG ATTACAAACA AAATACAAGT TTAGATTACT TAAAAGATTT ATATGGCAAA
CCACTAGCTG CGGGTCCATA TAAATTTGAA AAGTATATTC CAGGTCAAGA AGTTCGTTTT
ATAGCAAATG AAAATTACTA TGCGGGTAAA CCAAAAATTC AAAACTTCAT TTATAAAATT
ACTTCTGGCG ATACGAAGCT TCAGTTATTT CAAACAGGTG AGGTTGACCA CACTGGCTTA
GGTACTGGTG ACGAAGTTCT TGAACAGGCT AAGGCTTTAG AATTCGCAAA TATCCAAATC
GAAACAGCAC CATCATTTAG TTATGTTTAT ATGAATCATA ATAAGCCGTA TTTAAAGGAT
AAAAAGGTTC GCCAAGCGCT TATCTACGGA TTAGATCGTA AAAAATATGT TGATACAGCA
TACAAAGGAT ACGGTACGGT AGCGAATGTA CCAATTCATC CGACTTCTTG GGCTTACACA
GAAGAAGGCG TTAATAAATA TGAGTATGAC AAAGAAAAAG CGAAAAAGTT ACTAGATGAA
GCAGGATGGA AAGTTGGTTC GGATGGAATC CGGGAAAAAG ATGGTCAAAA ATTAAAACTT
TCGTATTTCG GTCCAAGTTC GGCTAAAGAT AGTGATTTAT TAATTCCAAT TGCTAAAGAG
AATTATAAAG AGATAGGTGT AGAATTTAAC CCTGAATTCA TGGACTTTAA TACAATGCTT
TCAAAAGTTA ATAAAGGTGA TTATGACTTA GCTTCTGTTT CAACACCGAT TACAAGTGAC
CCAAGTGAAA CAGCTGGTGA ATATTTATCT AGTGCGAATG AGAAGAGTCT TGGTTATAAA
AATGCAAAAG TAGATGAGTT AATTCAAAAA GGTATAGAAA CGGTAGATAT TGAAAAACGT
AAACCAATCT ATAAAGAACT TTATAAAGAA TTAAGTGATG ATCCACCAGT AATTCTCTTA
AACTATCGCA GAACAATCAC TGGTTATAAC GGGAATATAA AAGGAATCGA TCCTGAAAAA
TACAATAGTA TTAGTGCAAA CTTACCAGTA TTATCATTTG AAAAATAA
|
|---|
| Protein sequence | MKKKTKKWAG VFSVLLGSSL VLSACGGQED TASTESVKQQ DLKNIKIEKI AATDKTKVPD
KAKNRKDTLV VGINKPGGVF LPYFQQNGWD GNVTSVIFAS LISTDKQGKP IPELAENWDV
SSDQLTYTFH LRKDLKFSDG SPLTADDVAF TLTLLHDKAY EGEVDISQYA VKGGKEYKEG
KATSIEGIQV IDPQTIKITT EKVNSQAIFV FGNAVLSKAY YGKDYKQNTS LDYLKDLYGK
PLAAGPYKFE KYIPGQEVRF IANENYYAGK PKIQNFIYKI TSGDTKLQLF QTGEVDHTGL
GTGDEVLEQA KALEFANIQI ETAPSFSYVY MNHNKPYLKD KKVRQALIYG LDRKKYVDTA
YKGYGTVANV PIHPTSWAYT EEGVNKYEYD KEKAKKLLDE AGWKVGSDGI REKDGQKLKL
SYFGPSSAKD SDLLIPIAKE NYKEIGVEFN PEFMDFNTML SKVNKGDYDL ASVSTPITSD
PSETAGEYLS SANEKSLGYK NAKVDELIQK GIETVDIEKR KPIYKELYKE LSDDPPVILL
NYRRTITGYN GNIKGIDPEK YNSISANLPV LSFEK
|
|---|
| |