| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0232 |
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| Symbol | |
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| ID | 3907859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 264849 |
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| End bp | 266402 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637882114 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_483854 |
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| Protein GI | 86747358 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATAC TCGATCTGGG ATCACGAACC CTGCGACGCC GCGATATTCT GGCGCTGATC
GGCGGCGGCG CCGCAGCCGC TGCGGTCGGC CTGCCGGCGC TGGCGCAGGA GCCCAAGAAG
GGCGGCGTGC TGAAGGTCGC GGCCCCAGCG AATCCGTCGT CGCTCGATCC GGCCACCGGC
GGCGCCGGTT CCGACCACAG CATTCTCTGG ACGATCTACG ATACGCTGGT CGAGTGGGAC
TACGACACGC TGAAGCCGAG GCCCGGCATG GCGAAATGGT CGTATCCGAA TCCGACCACG
ATGGTGATCG ACATCACCCC CGGCATCCAG TTCCACGACG GCACCGCGAT GGACGCCGAG
GCGGTGAAGT TCAACCTCGA TCGCAACCGC TCCGATCAGC GGTCCAATAT CAAGTCGGAT
CTCGCCAGCA TCGAGTCGAT CGAGGTGACC AGCCCGCTGC AGGTGACGCT GAAGCTGAAG
AGCCCGGATA CATCCCTGCC GGCGATCCTG TCCGACCGCG CCGGCATGAT GGTGTCGCCG
ACCAACATCA AGGCGCTTGG CAACGAGACA GACCGCAAGC CGGTCGGCGC CGGGCCGTGG
AAGTTCGTGC GCTGGAACGA CAACGAAATC ATCGTCGTGG CTCGCCACGA GAACTACTGG
CGCAAGGGCC GGCCGTATCT CGACGGCATC GAGTTCAACA TCATCACCGA AAACGCCACG
GCGCTGCGGT CGGTGGTCGC CGGCCAGAAC GACATGGCAT TTCAGTTGCC GGCACGGCTG
AAGCCGGTGA TTGAGCGCGC CAAGGACCTG ACCATGGTCA GCTCGCCGAC GCTGTATTGC
ATTCAGGTGT ATTTCAACTA CGCCCGCGCG CCGCTCGACA ATCTCAAGGT TCGTCAGGCG
ATCAATTTCG CGTTCGACCG CGACACCTTC GTCAAGGCGG CGCTGAGCGG GCTCGGCGAA
TCGGCCCGGA TGACGCTGCC GAGCTCGCAC TGGGCGTTCA ACAAGGATGT GGCCGGCACC
TATCCGCACG ATCCGGAGAA GGCGAAGAAG TTGCTGGCAG AGGCCGGCTA CAAGGACGGC
CTCGAGCTGA CGATCGGCGG CTATACCGAT CAGGATTCGG TGCGCCGCGG CGAGGTGATC
CAGGATCAGC TCGGCAAGGT CGGCATCCGG CTCAAATTCA CCCGCGGCAC CATCGCGGAA
ATCAGCGCGC AGTTCTTCGC GCAGGAGAAG AAGTTCGACC TGTTGGTGTC GGCCTGGACC
GGGCGTCCCG ATCCGAGCAT GACCTATGGG CTCGGCTTCG ACAAAGGCGC GTACTACAAC
GCCGGCCGCA CCGCCGATCC TGAGCTGTCC AAGCTGATCC TCGAAAGCCG CGTCAGCGAG
GATTTGGCCA AGCGCGCCGA AGTGTTCGCC AGGATCCAGC GCATCACGGT CGAACAGGCA
CTGTCGGCGC CGCTGGCGTT CCAGTTCGAG CTCGACGCGC TGTCGTCCAA GGTGAAGGGC
TTCAAGCCCA ATCTGCTCGG CAAGCCGAAG TTCGAATACA TCTCCCTCGC GTGA
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| Protein sequence | MRILDLGSRT LRRRDILALI GGGAAAAAVG LPALAQEPKK GGVLKVAAPA NPSSLDPATG
GAGSDHSILW TIYDTLVEWD YDTLKPRPGM AKWSYPNPTT MVIDITPGIQ FHDGTAMDAE
AVKFNLDRNR SDQRSNIKSD LASIESIEVT SPLQVTLKLK SPDTSLPAIL SDRAGMMVSP
TNIKALGNET DRKPVGAGPW KFVRWNDNEI IVVARHENYW RKGRPYLDGI EFNIITENAT
ALRSVVAGQN DMAFQLPARL KPVIERAKDL TMVSSPTLYC IQVYFNYARA PLDNLKVRQA
INFAFDRDTF VKAALSGLGE SARMTLPSSH WAFNKDVAGT YPHDPEKAKK LLAEAGYKDG
LELTIGGYTD QDSVRRGEVI QDQLGKVGIR LKFTRGTIAE ISAQFFAQEK KFDLLVSAWT
GRPDPSMTYG LGFDKGAYYN AGRTADPELS KLILESRVSE DLAKRAEVFA RIQRITVEQA
LSAPLAFQFE LDALSSKVKG FKPNLLGKPK FEYISLA
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