| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_19910 |
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| Symbol | |
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| ID | 8387318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2123325 |
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| End bp | 2125094 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976054 |
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| Product | ABC-type dipeptide transport system, periplasmic component |
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| Protein accession | YP_003133836 |
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| Protein GI | 257056004 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000984023 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000242655 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTTGGTGG TCGTGCCGTT GGCGGCGTCG GTGCAGGCCG CGCCGGCGGC GCGGGCGCAG
TCTCCGCAGG TGTTGCGGGT GGCGTTGGTG CAGGAGATCG ACCATCTGAA CCCGTTCACG
GCCAGTTTCG CATCGAGCGC GATGATCGGA CGGTTTGCGT GGGAGTTTTT GACGCTGCCG
TCGGCTGAGG ATGCGACGCC GACCGGGGGT GTGGCGGAGT CGTGGGAGTC CTCGGAGGAC
AAACTCACGT GGACGTTCAC GATCCGGGAG GGGATGACCT GGTCGGATGG TGAGCCGGTG
ACGGCGCACG ACGCCGCGTT CACTTTCAAC AAGATCATGT CGGATCCGAA GGCGGCGGAG
GCCAACGGCA GTTACGTCGT CAACTTCAAG AAGGTGTCAG CACCCGACGA CCGGACGTTG
GTGATCGAGA CCGAAGAGCC GCAGGCGAGC ATGACGGCGT TGGATGTGCC GATCGTTCCG
GAGCACGTGT GGTCGAAGAT CGAGGACATG CACGACCCGG TCACCGACAG TATCGAGGTG
GTGGGGGTCG GTAGCGGTCC GTTCCTGATC GCCGAGTACC GCCCGAACGA GCTGGTGCGG
ATGACGGCGA ACAAGGACTA CTGGCGTGGC GCTCCGGCGT ACGACGAGTT GCACTTCATC
AAGTTCGAAA ACGCCGACGC GGCGGTGAAC GCGTTGCGCA ACGGCGAGGT GGACTTCGTC
AACCGGCTCA CGCGGGCGCA GTTCGACAGT CTGAAGAACG AGCCGAACAT CGAGACGAAC
CAGGCGTCGG GGCGGCGGTA CCGGGAGCTG TTGATGAACC CGGGTGCGCG TAACGCCGAC
GGTGACGCGA TCGGTGATGG TCACCCGGCT TTGCAGGACG TGCAGGTGCG GCGGGCGATC
GCGATGGCGA TCGACCCGGA GGTGTTGGTG GACAAGGTCC TCGGTGGTTA CGGCGAGTTG
CCGGGCGGGT TGGTGCCTCC GATCTATGAG GACTACCACT ACGTGCCGGA CGAGGACGTG
CGGTACTCGT TCGATCCGGA CGCGGCGAAC GCGCTGTTGG ACGAGGCGGG GTACCGGCGG
GGCCCGGACG GGGTCCGGGT GGACTCGGAA GGCAGGCGGC TGGAGTTCCG GCTGACCGGT
CGGGCCAGTG AGGACTATGC GCAGCGGGCC AGCGACTACA TCGTGTCGTG GTTGCGGGAC
ATCGGCATCG AGGTGACGAA GAACCTGGTG TCGGACAACG AGGTGGACGA GACCACCTCC
TCGGGGCATT ACGATCTGGC GTTCTCGGGG TGGGGCACGA ACCCGGACCC GGACTACATC
CTGAGCAAGC AGACGTGCGC GGCGCTTCCC GCGGCCTCGG GTAGCAGCAG TAGCAACGCG
TTCTTCTGCG ACGAGACCTA CGACAAGCTG TACGCCCAGC AGATCGCGGA GATGGACCCG
AAGAAGCGGG CGAAGCTGGT GTTGCAGGCG CAGGCCCGCT ACTACGAGAT GGTGCCGAGC
CTGGTGTTGG GCTACGACAA CGTGTTGGAG GCCTACCGGT CGGATCGGTT CACCGGCTTC
GTGCAGCAGC CGGAGGGCGA GGGCCAGATC ATGGAGCAGA CCGGTTACTG GGGTTTCTAC
GGCGCTCGGC CGGTGGAGGG CGCGGCCGAA AGTGACTCGG GCCTGCCGAC CGGGGTGTGG
TTGGCGTTGG GCGCGGGCGC GTTGGCGTTG TTGGCCGTTG GTGGCACGGT CGTGGTGCGT
CGCCGCGCGA CCGCCGACGA CAGGGAGTGA
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| Protein sequence | MLVVVPLAAS VQAAPAARAQ SPQVLRVALV QEIDHLNPFT ASFASSAMIG RFAWEFLTLP
SAEDATPTGG VAESWESSED KLTWTFTIRE GMTWSDGEPV TAHDAAFTFN KIMSDPKAAE
ANGSYVVNFK KVSAPDDRTL VIETEEPQAS MTALDVPIVP EHVWSKIEDM HDPVTDSIEV
VGVGSGPFLI AEYRPNELVR MTANKDYWRG APAYDELHFI KFENADAAVN ALRNGEVDFV
NRLTRAQFDS LKNEPNIETN QASGRRYREL LMNPGARNAD GDAIGDGHPA LQDVQVRRAI
AMAIDPEVLV DKVLGGYGEL PGGLVPPIYE DYHYVPDEDV RYSFDPDAAN ALLDEAGYRR
GPDGVRVDSE GRRLEFRLTG RASEDYAQRA SDYIVSWLRD IGIEVTKNLV SDNEVDETTS
SGHYDLAFSG WGTNPDPDYI LSKQTCAALP AASGSSSSNA FFCDETYDKL YAQQIAEMDP
KKRAKLVLQA QARYYEMVPS LVLGYDNVLE AYRSDRFTGF VQQPEGEGQI MEQTGYWGFY
GARPVEGAAE SDSGLPTGVW LALGAGALAL LAVGGTVVVR RRATADDRE
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