Gene Cagg_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1897 
Symbol 
ID7266388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2327358 
End bp2329022 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content58% 
IMG OID643566734 
Productextracellular solute-binding protein family 5 
Protein accessionYP_002463228 
Protein GI219848795 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTG TGGTGAGTGT GTGGCTGGCA GCTTGTGGTT GGACGGTTCC TCCCACGCCG 
GTCGTACCGG AACCACCGAC ACCAACCCTA CCGCCAACAC CATCACCGTT ACCGCGAGGT
GGAGTACTCA CCCTGCGCAT TGGCGCTGAT ATTACCGATA TACGACCGTG GCAGCCCCGT
TCACGAGGTG AGGAATATCT GATCGGTTTA CTATACAGTG GGTTGATGCG GCTTGATGCC
GATCTCTGGC CAACTCCCGA TCTGGCCGAA CGACTTGATA TTGATGCAAG CGGTCGCGTC
TTGACCTTCA CCTTGCGCCC TAATTTACGC TGGCACGATG GTCAACCACT GACTGCCGCC
GATGTGCTCT TTACCCTCGA AGCGTTGCGT AATCTACCCG AAACCAGTAC CGCATTGTTA
GCCGATTTAC GCTATATTGT CACCGCTTCG GCCATTGATG AGCGCACGGT CGTCATCGAA
CTACGGAGTC GTTATGCGCC GATGCTTAGC TTATTGGCTG TGCCGATCTT GCCGCGCCAC
CTCTTCGCCG ATCGTGATGT AAGCAAGATC AACTTTCTCG ATCAGCCGAT CGGGAGTGGT
CCGTTTCGCT TGATCGAACG GCAAGCAGGT GTGAGTTTGA CCCTCGAACG CTTTGAGCAG
TATCACCACG GGGCACCGTT GTTAGATCGG GTGGTGTTGT CGGTGATCCC AGAAACGGTG
CTGGCCCAAC GTGCGTTGCG CGATGGTCAA TTGCTTGTGG CCGAATTGCC GTGGGGCGCG
CAAGAGGCGC TCGCCGATGT AGCTTCCTTG CGCAGCGGCA GTATTCCCGA AAACGGGGTC
TATTTTCTGG CGTTTAATCT CCGTCCTGGT CGGCCATTTG CCGATGTGCG CTTGCGACAA
GCTTTAGCTA CGGCTATTGA TTTGCCGCGT TTGGTAGAGA CGGCGACCAA AGGCAGCGGA
ATACCGGTAG GGAATGGCGC GGTGCCGGGG AGTTGGGCGG ATATGACACC ACCGGTAACG
TCGGGTGATT TGCCGGCGGC ACGCGCATTA CTCGATGCCG CCGGTTGGAC GTTGCCGCCG
GGAGCTACGA TCCGTCAGCG CGAAGGCGTA CCGCTGATTG CCCGCCTTTA TGTGCGCAAT
GACGACGAAC GGCGGGTCGT GGCAGCCCGG CGGATTGCCG AGATCGCTGC CAGTATTGGG
ATACAGATTG AGGTCGAGCC GGTCGATTTC GCCACCGTCA TACTCGCACG CTATGTTGCC
CCCTACGACT TCGATCTCTT GTTAGGCAGT TGGCTCAACG GAGCCGGTGA CCCGACGTTC
GGCGATACGA TGTTCTACGA TCCCGACGAT TTTGCCCTCT TTCATTCTAG CCAGCTCGAA
CAAGGGCCGG CTGATACACG GGTGACACGC AATTTCGTCG GATTTAACGA TCCGATCTAC
GATGAACAAG CATTGATTGC ACGCCAACTC TACGGCCGGG AAGAGCGGCG CAGCGCCATC
GCTCAGGCGC AGAGCCGGAT CGCCACCGCA TTGCCCTATC TCTACCTGTG GGTCGACCGA
ACCGCCGTAG TGCTCGCTAC GCGCCTGTAC ACACTCGATG GGCCAATCGA TCTGAGTACG
CCGCGCTTTT TGTGGAATAT CGAGCGCTGG TATCTTCAGC CGTAA
 
Protein sequence
MLIVVSVWLA ACGWTVPPTP VVPEPPTPTL PPTPSPLPRG GVLTLRIGAD ITDIRPWQPR 
SRGEEYLIGL LYSGLMRLDA DLWPTPDLAE RLDIDASGRV LTFTLRPNLR WHDGQPLTAA
DVLFTLEALR NLPETSTALL ADLRYIVTAS AIDERTVVIE LRSRYAPMLS LLAVPILPRH
LFADRDVSKI NFLDQPIGSG PFRLIERQAG VSLTLERFEQ YHHGAPLLDR VVLSVIPETV
LAQRALRDGQ LLVAELPWGA QEALADVASL RSGSIPENGV YFLAFNLRPG RPFADVRLRQ
ALATAIDLPR LVETATKGSG IPVGNGAVPG SWADMTPPVT SGDLPAARAL LDAAGWTLPP
GATIRQREGV PLIARLYVRN DDERRVVAAR RIAEIAASIG IQIEVEPVDF ATVILARYVA
PYDFDLLLGS WLNGAGDPTF GDTMFYDPDD FALFHSSQLE QGPADTRVTR NFVGFNDPIY
DEQALIARQL YGREERRSAI AQAQSRIATA LPYLYLWVDR TAVVLATRLY TLDGPIDLST
PRFLWNIERW YLQP