Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4859 |
Symbol | |
ID | 5154537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5101740 |
End bp | 5103338 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640559657 |
Product | putative ABC transporter, substrate-binding protein |
Protein accession | YP_001240788 |
Protein GI | 148256203 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.176928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.590645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCTCA CGCGTCGCAA TCTCAGCAAG ACCCTTCTAT TCGGAACGAT CACTGCCGCC GCCGGCCATG CGCGCACGTC GCAGGCCGCA GAGCCGCGGC GTGGCGGAAC GCTCAACCTG GTCATTCAGC CCGAACCCCC GATTCTGGTG AGCCTCACTC ATACCGCAGG GCCGACGACG CGGGTCAGCC CGAAGATCAC GGAAGGTCTT CTCACCTTTG ATCTCGACTT CAGGCCGCGG CCGCAACTGG CGACGGACTG GCAAGTCAGC GACGACGGCC TGCGCTACAC CTTTGCTCTG CGGCGCGGCG TGAAGTGGCA TGACGGCCGG GATTTCACCT CGGCCGACGT CGCCTACTCC ATCAGCCTGC TCAAGCAGCA TCACCCGCGC GGCCGCGGCA CGCTGTCGTC CGTCCGCGAG GTCGAGACAC CCGATGCGCA CACCGCCACA ATCGCGCTGG ACAAGCCGGC GCCCTATCTG CTCGCCGCGT TGACGGCCTC GGAATCGCCG ATCGTGCCGC GCCATGTCTA TGAGGGCAGC GATCCCCTGA ACAATCCGAA CGGGCGTGCG CCGATCGGTA CCGGTCCGTT CGTGTTCAAG GAGTGGCAGC AGGGCAGCCA CATCATTCTC GAGCGCAATC CGACTTATTG GGACCCGGGC AAGCCCTATC TCGACCGTAT CGTCGTCCGC TTCATCGCCG ATGCCAATGC ACGCGCCGTC GCGCTGGAGA CCGGTGAGAT CCATCTGGCG CCCGACACGC CGGTTCCGCT CGGACAGATC GAAGCGCTGA AGTCCAACCC GGCGCTGCTG ATCGAGACCC GCGGCTACGA TTACCAGCCG ATCGTCTACC GCCTCGAATT CAATCTCGCC AATCCATACT TCGCCAAGCG CGAGGTGCGC GCCGCCGTCG CCCACGCGAT CGATCGCGAC GCGATCACCC GCGTCGTGTT CTATGGCTGG GGCCGGAATG CGCCGAGCGC AATCAGCCCT GCCCTGAAGC AGTTCCACAA CCCCGACATT CCCCGCCACG ATTTCGATCC GAAGAAGGCC GAGGCGCTGC TCGATGCCGC CGGCTATCCA CGCGGTCCAG ACGGCATCCG CTTCAAGGTG TTCCACGACT ACATGCCCTA CAGCGAGGCC TACCAGCAGC TCGGCGCCTA CACGCGCCAG GCGCTCGCCA ATATCGGCAT TGGCGTGACC TTGCGGGCGC AGGACGTCCC GACCTGGTTC AAACGGACCT ACACCAACCG CGATTTCGAT TTCATGAGCA ACGGCATGAG CAACTCGTTC GATCCGACGG TCGGGGTGCA GCGGCTGTAT TGGTCGAAGA ACTTCAAGCC CGGCGTGCCA TTCTCCAACG GCTCGGGCTA CAGCAATCCG GAGGTCGACC GGCTGCTCGA AGCGGCCGCA GTCGAGAGCG ATCCGGCCAG GCGACGCGAA CTGTTCAAGG CCTTCCAGGT CATCGTCGCC ACCGACCTGC CCGACGTCAA TCTCGTCACC GGCGCCAACC TGACCATCGC CAATCGCAAG GTGCGCGACC ACACCACCAC GATCGACGGC CCATCGGCGA ACTTCGCCGA TGTCTGGCTC GAGGCATAG
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Protein sequence | MLLTRRNLSK TLLFGTITAA AGHARTSQAA EPRRGGTLNL VIQPEPPILV SLTHTAGPTT RVSPKITEGL LTFDLDFRPR PQLATDWQVS DDGLRYTFAL RRGVKWHDGR DFTSADVAYS ISLLKQHHPR GRGTLSSVRE VETPDAHTAT IALDKPAPYL LAALTASESP IVPRHVYEGS DPLNNPNGRA PIGTGPFVFK EWQQGSHIIL ERNPTYWDPG KPYLDRIVVR FIADANARAV ALETGEIHLA PDTPVPLGQI EALKSNPALL IETRGYDYQP IVYRLEFNLA NPYFAKREVR AAVAHAIDRD AITRVVFYGW GRNAPSAISP ALKQFHNPDI PRHDFDPKKA EALLDAAGYP RGPDGIRFKV FHDYMPYSEA YQQLGAYTRQ ALANIGIGVT LRAQDVPTWF KRTYTNRDFD FMSNGMSNSF DPTVGVQRLY WSKNFKPGVP FSNGSGYSNP EVDRLLEAAA VESDPARRRE LFKAFQVIVA TDLPDVNLVT GANLTIANRK VRDHTTTIDG PSANFADVWL EA
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